Input sequence

Protein name Retrovirus-related Pol polyprotein from transposon RE2
Organism Arabidopsis thaliana Length 1456
Disorder content 20.3% ProS content 14.1%
IDEAL NA UniProt Q9ZT94

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1456 1-18 19-64 65-68 69-190 191-302 303-306 307-735 736-843 844-853 854-910 911-1456 19-64 69-190 307-735 844-853 911-1456 1-18 191-302 736-843 854-910 14-18 191-194 203-210 218-244 251-284 297-302 743-843 854-868 905-910 479-663 502-725 1243-1278 980-1188 509-614 498-658 954-1211 1219-1446 944-1301 502-663 494-661 965-1401 8-19 210-247 276-292 755-770 777-786 793-814 828-900 3l2rA(87-266) 2e-07 28.95% 1ex4A(2-211) 3e-42 7.14% 1ezeA(2-37) 4e-12 22.22% PF07727(4-210) 2e-60 51.67% PF00665(6-116) 4e-05 26.79% PF00665 3.8e-48 170.5% PF07727 4.5e-161 545.7% 1zt2B1(3-185) 1e-28 8.77% 1ihpA(55-409) 4e-24 9.46% 1b92A(2-140) 3e-10 8.02% c.55.3 4.7e-36 126.5% e.8.1 7.4e-45 146.0%

Sequence

MATHAEEIVLVNTNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPA
TIGTDAVPRVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANP
SYGHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEI
HERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPS
SSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLA
VNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTS
SRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDEL
YEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCS
DCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPL
KQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEH
NGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQ
PPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRH
VQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRP
PSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNP
NPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQ
VNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEIN
AQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAET
FSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVC
RLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILIT
GNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLT
AKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPT
DDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHH
PISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATY
LCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRK
IGVIKVPPSCGGVLRI

Region:1-1456
Length:1456aa
Label:Full sequence
Reset:click