Input sequence

Protein name RNA polymerase sigma factor sigD, chloroplastic
Organism Arabidopsis thaliana Length 419
Disorder content 32.9% ProS content 16.5%
IDEAL NA UniProt Q9ZSL6

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 419 1-122 123-148 149-161 162-165 166-416 417-419 123-148 166-416 1-122 149-161 417-419 1-12 16-24 43-54 69-73 87-96 102-122 142-404 142-412 187-244 183-253 257-339 351-404 177-250 347-403 254-312 107-253 256-330 313-417 2-12 54-65 78-87 94-108 4jk1X(257-508) 1e-40 32.7% 4jk1X(257-516) 1e-46 32.1% PF04542(5-62) 7e-07 43.1% PF04542 2.3e-24 91.6% PF04539 2.4e-23 88.1% PF04545 1.1e-17 69.3% 1sigA(232-305) 5e-23 48.65% 1ku3A(1-57) 1e-09 40.35% 1iw7F1(1-61) 1e-07 31.15% a.177.1 3.9e-35 123.2% a.4.13 4.1e-16 54.7% a.4.13 1.9e-19 70.3%

Sequence

MATTIPTTATATMCPSPPVPTISPLLRTTHQCQPSPSLSSPFSIKLSTALVCGDTTVDRV
VDSSVMIKPEKWGIQSEKRRKRRRRRRVGYERLEPEEEENAGVEAEAETISVPVVGASRS
GFLSRLEEVQLCLYLKEGAKLENLGTSVEENEMVSVLLASGRGKKKRSANEILCRRKEAR
EKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIK
QAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRL
AVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARES
RVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIYYSSSE

Region:1-419
Length:419aa
Label:Full sequence
Reset:click