Input sequence

Protein name Voltage-dependent T-type calcium channel subunit alpha-1I
Organism Rattus norvegicus Length 2201
Disorder content 44.3% ProS content 19.4%
IDEAL NA UniProt Q9Z0Y8

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2201 1-43 44-405 406-578 579-825 826-1081 1082-1697 1698-2201 44-405 579-825 1082-1697 1-43 406-578 826-1081 1698-2201 38-43 414-419 429-463 472-525 535-578 826-832 844-875 899-924 930-938 945-982 1020-1037 1051-1081 1705-1717 1769-1788 1898-1902 1911-1915 1939-1942 1961-1966 1974-1989 2005-2011 2078-2082 2142-2170 2192-2201 753-849 1482-1688 1165-1389 632-819 118-205 314-395 115-395 632-819 1165-1389 1480-1688 1442-1577 73-185 594-663 1125-1203 77-404 551-828 1042-1398 1439-1697 7-16 24-42 207-228 370-381 466-482 531-554 664-678 685-701 725-739 919-940 962-972 984-1021 1069-1082 1207-1220 1227-1244 1397-1426 1581-1590 1716-1736 1751-1764 1839-1855 1924-1935 1991-2007 2043-2060 2089-2099 2105-2128 2176-2192 1392-1426 119-138 211-233 341-363 373-395 720-742 764-786 798-820 1126-1148 1168-1190 1205-1227 1265-1287 1368-1390 1443-1465 1480-1502 1578-1600 1623-1642 1663-1685 4ltoA(26-124) 6e-09 18.81% PF00520(3-198) 9e-29 33.95% PF00520(1-198) 8e-25 37.78% PF00520(1-198) 8e-14 33.33% PF00520(3-92) 2e-11 39.78% PF00520(123-198) 1e-10 45.12% PF00520 2.2e-64 224.5% PF00520 8.9e-56 195.9% PF00520 1.4e-66 231.8% PF00520 3e-56 197.5% 1orsC(2-132) 4e-15 12.32% 1orsC(2-107) 2e-09 13.79% 1orsC(2-71) 1e-06 9.86% 1orsC(2-74) 0.001 15.0% f.14.1 6.9e-34 117.7% f.14.1 3.3e-38 132.7% f.14.1 5e-39 135.6% f.14.1 4.2e-33 115.0%

Sequence

MADSNLPPSSAAAPAPEPGITEQPGPRSPPPSPPGLEEPLEGTNPDVPHPDLAPVAFFCL
RQTTSPRNWCIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMECLSDRCKILQVFDDFI
FIFFAMEMVLKMVALGIFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRV
LRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFLE
ENFTIQGDVALPPYYQPEEDDEMPFICSLTGDNGIMGCHEIPPLKEQGRECCLSKDDVYD
FGAGRQDLNASGLCVNWNRYYNVCRTGNANPHKGAINFDNIGYAWIVIFQVITLEGWVEI
MYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSS
STVASYAEPGDCYEEIFQYVCHILRKAKRRALGLYQALQNRRQAMGPGTPAPAKPGPHAK
EPSHCKLCPRHSPLDPTPHTLVQPISAILASDPSSCPHCQHEAGRRPSGLGSTDSGQEGS
GSGGSAEAEANGDGPQSSEDGVSSDLGKEEEQEDGAARLCGDVWRETREKLRGIVDSKYF
NRGIMMAILVNTVSMGIEHHEQPEELTNILEICNVVFTSMFALEMILKLAAFGLFDYLRN
PYNIFDSIIVIISIWEIVGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNV
ATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLWAIVTVFQILTQED
WNVVLYNGMASTTPWASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDEDQSS
SNLEEFDKLPEGLDNSRDLKLCPIPMTPNGHLDPSLPLGAHLGPAGTMGTAPRLSLQPDP
VLVALDSRKSSVMSLGRMSYDQRSLSSSRSSYYGPWGRSGTWASRRSSWNSLKHKPPSAE
HESLLSGEGGGSCVRACEGAREEAPTRTAPLHAPHAHHAHHGPHLAHRHRHHRRTLSLDT
RDSVDLGELVPVVGAHSRAAWRGAGQAPGHEDCNGRMPNIAKDVFTKMDDCRDRGEDEEE
IDYTLCFRVRKMIDVYKPDWCEVREDWSVYLFSPENKFRILCQTIIAHKLFDYVVLAFIF
LNCITIALERPQIEAGSTERIFLTVSNYIFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWN
VLDGFLVFVSIIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLIS
SLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNRSDCVAANYRWVHHKY
NFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLIVSFF
VLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCPTRLLIH
SMCTSHYLDIFITFIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLKLVAF
GLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKM
ATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATF
ENFGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDERSCLSSLQFVSPLYFVSFVLTAQFVL
INVVVAVLMKHLDDSNKEAQEDAEMDAEIELEMAHGLGPCPGPCPGPCPCPWPLAPVLAR
GCPLVLLGATGARIGRGRCWRRHRESPVPSTRYSPAQETLWLDSVSLIIKDSLEGELTII
DNLSGSVFHHYASPDGCGKCHHDKQEVQLAETEAFSLNSDRSSSILLGDDLSLEDPTACP
PGRKDSKGELDPPEPMRVGDLGECFFPLSSTAVSPDPENFLCEMEEIPFNPVQSWLKHDS
SQAPPSPFSPDGSSPLLQMPAEFFHPAVSASQKGPEKGTGTGTLPKIALQGSWASLRSPS
VNCTLLRQATGSDTSLDASPSSSAGSLQTTLEDSLTLSDSPRRALGPPVQVPGPRASLSP
ATRRRLSLRGRGLFSLRGLRAHQRSHSSGGSTSPGCTHHDSMDPSDEEGRGGAGGGGAGS
EHSETLSSLSLTSLFCLPPTLPPPGLTPARKFNSTSSLAAGPGRPGSTVSARGLVRSPSW
AADRSKDPPGQAQLVSGLGSSAPGPQPPPGESTDAASKRKR

Region:1-2201
Length:2201aa
Label:Full sequence
Reset:click