Input sequence

Protein name Sodium channel protein type 10 subunit alpha
Organism Homo sapiens Length 1956
Disorder content 26.2% ProS content 17.1%
IDEAL NA UniProt Q9Y5Y9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1956 1-11 12-20 21-75 76-438 439-614 615-896 897-904 905-936 937-1108 1109-1821 1822-1830 1831-1875 1876-1956 12-20 76-438 615-896 905-936 1109-1821 1831-1875 1-11 21-75 439-614 897-904 937-1108 1822-1830 1876-1956 1-11 21-34 51-75 439-457 467-545 560-572 596-614 954-975 984-1013 1025-1032 1041-1049 1077-1094 1822-1830 1876-1906 1915-1935 1943-1949 1726-1871 1431-1451 1726-1871 1431-1451 156-175 156-396 1190-1379 701-861 1515-1674 1063-1162 155-396 699-889 904-1162 1188-1417 1510-1721 1471-1557 661-746 1148-1233 169-268 1524-1603 114-405 665-893 1110-1426 1460-1749 535-550 751-764 871-895 1001-1016 1102-1113 1248-1263 1398-1408 1573-1590 1699-1712 397-438 126-145 157-179 189-206 219-241 246-268 334-353 373-395 658-680 695-717 783-805 868-890 1152-1171 1191-1210 1217-1239 1281-1303 1353-1375 1395-1417 1538-1560 1602-1624 1697-1719 4dckA(1-146) 1e-57 74.66% 1byyA(1-21) 8e-05 100.0% 4dckA(1-146) 1e-45 74.66% 1byyA(1-21) 5e-06 100.0% 1qg9A(2-21) 0.0002 80.0% PF00520(2-198) 1e-28 31.17% PF00520(3-170) 3e-26 41.05% PF00520(3-171) 1e-15 36.09% PF00520(6-171) 5e-13 38.01% PF06512(124-219) 2e-11 41.0% PF00520 2.8e-72 250.7% PF00520 1.5e-56 198.4% PF06512 3.4e-74 257.1% PF00520 1.4e-67 235.1% PF00520 2.8e-58 204.2% 1orsC(1-88) 4e-17 11.36% 1orsC(2-87) 7e-14 12.64% 1orsC(2-85) 7e-11 12.79% 2e9xC1(1-102) 4e-12 12.5% 2e9xC1(1-82) 2e-05 12.2% f.14.1 7.3e-30 103.7% f.14.1 2.3e-26 91.6% f.14.1 1.7e-38 133.7% f.14.1 8e-35 121.0%

Sequence

MEFPIGSLETNNFRRFTPESLVEIEKQIAAKQGTKKAREKHREQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSWFSLFITVTILVNCVCMTRTDLPEKIEYVFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNDMAVNETTNYSSHRKPDIYIN
KRGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDSWER
LYQQTLRTSGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATTDEIEAKEKKFQE
ALEMLRKEQEVLAALGIDTTSLHSHNGSPLTSKNASERRHRIKPRVSEGSTEDNKSPRSD
PYNQRRMSFLGLASGKRRASHGSVFHFRSPGRDISLPEGVTDDGVFPGDHESHRGSLLLG
GGAGQQGPLPRSPLPQPSNPDSRHGEDEHQPPPTSELAPGAVDVSAFDAGQKKTFLSAEY
LDEPFRAQRAMSVVSIITSVLEELEESEQKCPPCLTSLSQKYLIWDCCPMWVKLKTILFG
LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIAFD
PYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLIKII
GNSVGALGNLTIILAIIVFVFALVGKQLLGENYRNNRKNISAPHEDWPRWHMHDFFHSFL
IVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTA
PEDDGEVNNLQVALARIQVFGHRTKQALCSFFSRSCPFPQPKAEPELVVKLPLSSSKAEN
HIAANTARGSSGGLQAPRGPRDEHSDFIANPTVWVSVPIAEGESDLDDLEDDGGEDAQSF
QQEVIPKGQQEQLQQVERCGDHLTPRSPGTGTSSEDLAPSLGETWKDESVPQVPAEGVDD
TSSSEGSTVDCLDPEEILRKIPELADDLEEPDDCFTEGCIRHCPCCKLDTTKSPWDVGWQ
VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE
MLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALRPLRA
LSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINYTDGEFSL
VPLSIVNNKSDCKIQNSTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSR
EVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQK
KYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVETDDQ
SEEKTKILGKINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVVLSIASLIFSAIL
KSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YSIFGMSSFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDP
NLPNSNGTRGDCGSPAVGIIFFTTYIIISFLIMVNMYIAVILENFNVATEESTEPLSEDD
FDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDKIHC
LDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKSSYEPIATTLRWKQEDISATVIQK
AYRSYVLHRSMALSNTPCVPRAEEEAASLPDEGFVAFTANENCVLPDKSETASATSFPPS
YESVTRGLSDRVNMRTSSSIQNEDEATSMELIAPGP

Region:1-1956
Length:1956aa
Label:Full sequence
Reset:click