Input sequence

Protein name Protocadherin alpha-1
Organism Homo sapiens Length 950
Disorder content 15.8% ProS content 13.2%
IDEAL NA UniProt Q9Y5I3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 950 1-9 10-678 679-690 691-780 781-863 864-904 905-950 10-678 691-780 864-904 1-9 679-690 781-863 905-950 1-9 781-795 800-863 905-920 930-950 27-129 194-657 80-234 140-667 27-129 30-109 253-341 355-445 461-556 581-670 29-112 138-233 247-341 355-446 460-556 573-670 198-605 34-313 577-669 21-126 127-234 236-342 344-447 443-606 559-671 5-24 706-721 918-942 1wuzA(1-103) 1e-45 86.41% 3q2wA(60-528) 9e-31 25.41% 2a4eA(54-208) 4e-07 31.48% 3q2wA(7-538) 3e-94 23.84% 1wuzA(1-103) 2e-26 86.41% PF08266(2-81) 4e-21 60.0% PF00028(7-92) 4e-08 42.7% PF00028(1-91) 2e-07 42.86% PF00028(2-92) 2e-06 39.58% PF00028(5-92) 7e-05 40.0% PF08266 5.2e-42 150.2% PF00028 1.5e-07 35.7% PF00028 3.6e-25 94.2% PF00028 3.6e-13 54.3% PF00028 5.3e-16 63.8% PF00028 5.9e-13 53.6% 1dnvA(14-391) 8e-67 6.76% 2nlzA1(266-529) 5e-24 8.9% 1edhA1(7-96) 1e-10 12.63% b.1.6 5.4e-10 37.5% b.1.6 1.8e-23 82.1% b.1.6 4.7e-31 108.1% b.1.6 1.5e-27 96.1% b.1.6 8.6e-34 116.7% b.1.6 1.7e-18 65.0%

Sequence

MVFSRRGGLGARDLLLWLLLLAAWEVGSGQLHYSIPEEAKHGTFVGRVAQDLGLELAELV
PRLFRVASKTHRDLLEVNLQNGILFVNSRIDREELCQWSAECSIHLELIADRPLQVFHVE
VKVKDINDNPPVFRGREQIIFIPESRLLNSRFPIEGAADADIGANALLTYTLSPSDYFSL
DVEASDELSKSLWLELRKYLDREETPELHLLLTATDGGKPELQGTVELLITVLDVNDNAP
LFDQAVYRVHLLETTANGTLVTTLNASDADEGVNGEVVFSFDSGISRDIQEKFKVDSSSG
EIRLIDKLDYEETKSYEIQVKAVDKGSPPMSNHCKVLVKVLDVNDNAPELAVTSLYLPIR
EDAPLSTVIALITVSDRDSGANGQVTCSLMPHVPFKLVSTFKNYYSLVLDSALDRESLSV
YELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAR
DADAQENALVSYSLVERRVGERALSNYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
GVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTIGAVSELVPRLVGAGHVVAKVRAVDAD
SGYNAWLSYELQPAAGGARIPFRVGLYTGEISTTRVLDEADLSRYRLLVLVKDHGEPALT
ATATVLVSLVESGQAPKASSRASVGVAGPEAALVDVNVYLIIAICAVSSLLVLTLLLYTA
LRCSVPPTEGAYVPGKPTLVCSSALGSWSNSQQRRQRVCSSEGPPKTDLMAFSPGLSPSL
NTSERNEQPEANLDLSGNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWP
TVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR
QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Region:1-950
Length:950aa
Label:Full sequence
Reset:click