Input sequence

Protein name Protocadherin alpha-11
Organism Homo sapiens Length 949
Disorder content 16.8% ProS content 13.8%
IDEAL NA UniProt Q9Y5I1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 949 1-7 8-568 569-572 573-675 676-690 691-725 726-734 735-778 779-861 862-904 905-949 8-568 573-675 691-725 735-778 862-904 1-7 676-690 726-734 779-861 905-949 676-681 726-734 779-794 799-861 905-921 930-949 27-129 201-569 481-670 152-666 27-129 30-111 249-340 460-555 354-444 580-669 29-112 138-233 247-340 354-445 459-555 578-669 201-604 34-311 587-668 21-126 127-234 230-383 343-446 442-562 558-670 14-21 187-200 705-725 917-941 695-717 1wuzA(1-103) 7e-47 88.35% 3q2wA(67-451) 3e-28 27.23% 4nupA(28-217) 5e-07 25.76% 3q2wA(17-538) 5e-89 22.45% 1wuzA(1-103) 2e-25 88.35% PF08266(2-83) 2e-22 62.2% PF00028(3-92) 3e-10 45.65% PF00028(2-92) 6e-07 40.62% PF00028(1-91) 8e-07 41.76% PF00028(5-92) 7e-05 37.78% PF08266 6.4e-45 159.8% PF00028 1.6e-06 32.2% PF00028 5.1e-26 97.0% PF00028 1e-10 46.2% PF00028 3e-15 61.3% PF00028 3.6e-09 41.1% 1dnvA(17-391) 2e-67 7.32% 2nlzA1(266-528) 9e-24 8.28% 1edhA1(13-96) 4e-10 11.9% b.1.6 9.2e-11 40.2% b.1.6 5.1e-22 77.1% b.1.6 1.4e-37 129.6% b.1.6 3e-26 91.6% b.1.6 6.7e-29 99.9% b.1.6 1.8e-18 64.9%

Sequence

MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELV
QRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVN
VEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSL
DSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDP
EFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGE
VRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVRE
DAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAY
ELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARD
ADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG
VPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADS
GYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTA
TATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTAL
WWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLN
KEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPT
VSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQ
EPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Region:1-949
Length:949aa
Label:Full sequence
Reset:click