Input sequence

Protein name Protocadherin gamma-A1
Organism Homo sapiens Length 931
Disorder content 13.4% ProS content 11.0%
IDEAL NA UniProt Q9Y5H4

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 931 1-22 23-675 676-686 687-779 780-844 845-904 905-931 23-675 687-779 845-904 1-22 676-686 780-844 905-931 6-22 676-686 780-820 831-844 905-923 184-560 26-137 127-240 461-666 155-665 30-234 31-111 579-664 249-338 352-442 461-541 29-112 138-233 247-338 352-443 457-553 576-665 199-602 31-297 584-667 31-125 127-234 236-339 341-444 440-582 555-666 13-24 542-553 693-708 912-931 691-713 3q2vA(41-439) 1e-28 31.05% 1wyjA(8-119) 8e-24 43.75% 2ystA(8-119) 2e-05 28.57% 4nupA(11-217) 8e-11 27.98% 3q2wA(16-541) 5e-85 23.73% 2wcpA(15-206) 4e-25 21.33% PF08266(3-83) 4e-19 51.85% PF00028(6-91) 2e-11 44.19% PF00028(3-92) 6e-10 43.48% PF00028(1-91) 5e-09 37.36% PF00028(5-80) 5e-05 34.57% PF08266 1.9e-51 181.5% PF00028 5.6e-08 37.1% PF00028 6.2e-24 90.1% PF00028 9.8e-12 49.6% PF00028 1.4e-19 75.7% PF00028 6.7e-13 53.5% 1dnvA(15-391) 9e-63 7.25% 1t8rA(7-300) 9e-25 7.12% 1edhA1(12-99) 2e-12 14.61% b.1.6 5.7e-09 32.6% b.1.6 2.4e-23 81.7% b.1.6 9.9e-31 107.0% b.1.6 1.4e-26 92.7% b.1.6 5.2e-31 107.1% b.1.6 3.7e-20 72.1%

Sequence

MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA
DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE
VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL
DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP
AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE
ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF
PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI
TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD
SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP
PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH
KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
SQESCEKKGFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK

Region:1-931
Length:931aa
Label:Full sequence
Reset:click