Input sequence

Protein name Protocadherin gamma-B1
Organism Homo sapiens Length 927
Disorder content 14.9% ProS content 11.1%
IDEAL NA UniProt Q9Y5G3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 927 1-21 22-669 670-680 681-709 710-719 720-769 770-831 832-856 857-865 866-902 903-927 22-669 681-709 720-769 832-856 866-902 1-21 670-680 710-719 770-831 857-865 903-927 5-21 670-675 710-719 773-780 792-795 805-831 857-865 903-924 191-556 45-317 473-662 156-658 30-231 29-109 574-656 246-321 455-548 352-438 29-109 135-230 244-332 348-439 453-549 571-661 195-598 70-309 580-657 1-95 27-123 124-231 233-335 337-440 441-550 552-662 688-717 908-927 687-709 3q2vA(60-439) 6e-32 28.97% 2a62A(21-293) 5e-27 33.45% 4nupA(28-217) 9e-10 29.0% 3q2wA(25-538) 5e-86 22.78% 2wcpA(15-206) 2e-24 24.04% PF08266(1-84) 9e-17 48.81% PF00028(5-87) 1e-10 46.99% PF00028(3-77) 2e-09 51.32% PF00028(3-91) 1e-08 39.36% PF00028(5-91) 3e-05 35.63% PF08266 5.4e-41 146.8% PF00028 3.3e-09 41.2% PF00028 4.5e-21 80.6% PF00028 1e-13 56.2% PF00028 1e-21 82.7% PF00028 0.00047 24.1% 1dnvA(14-391) 3e-67 9.27% 2nlzA1(310-530) 2e-25 9.72% 1edhA1(12-93) 2e-10 10.98% 1f5aA1(24-116) 4e-15 12.37% b.1.6 2.9e-09 34.9% b.1.6 3.7e-24 84.5% b.1.6 3e-31 108.8% b.1.6 2.2e-24 85.2% b.1.6 1.6e-29 104.7% b.1.6 1.7e-19 68.4%

Sequence

MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP
TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI
QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK
ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS
QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN
GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT
VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA
TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN
GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA
NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL
SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF
ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE
GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD
PSMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT
EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT
NAAGKRDGKAPAGGNGNKKKSGKKEKK

Region:1-927
Length:927aa
Label:Full sequence
Reset:click