Input sequence

Protein name Protocadherin gamma-C5
Organism Homo sapiens Length 944
Disorder content 14.9% ProS content 10.6%
IDEAL NA UniProt Q9Y5F6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 944 1-18 19-674 675-686 687-712 713-740 741-765 766-770 771-795 796-847 848-867 868-874 875-894 895-898 899-920 921-944 19-674 687-712 741-765 771-795 848-867 875-894 899-920 1-18 675-686 713-740 796-847 868-874 921-944 8-18 675-679 713-740 802-814 822-833 868-874 921-944 193-654 28-129 127-236 152-654 34-235 30-111 247-340 579-654 460-555 361-444 29-112 138-233 247-341 355-445 459-555 575-667 200-626 127-243 123-237 13-99 26-126 127-234 235-342 343-446 447-556 558-668 655-673 696-714 722-735 925-944 690-712 3q2wA(59-528) 9e-26 25.56% 1wuzA(2-103) 2e-22 44.12% 2ee0A(8-114) 0.0002 30.77% 3q2wA(17-528) 2e-78 22.91% 2wcpA(19-207) 1e-27 23.9% PF08266(2-83) 3e-15 47.56% PF00028(1-91) 1e-08 39.36% PF00028(5-79) 3e-07 40.79% PF00028(2-92) 4e-07 35.42% PF00028(7-91) 0.0002 36.78% PF08266 9.7e-45 159.2% PF00028 5.8e-14 57.0% PF00028 2.5e-21 81.4% PF00028 1.4e-09 42.4% PF00028 1.2e-19 75.9% PF00028 4.5e-11 47.4% 1dnvA(16-414) 3e-61 6.88% 1l3wA5(1-107) 2e-15 15.25% 1op4A(3-103) 1e-10 10.43% 1f5aA1(37-117) 9e-14 11.49% b.1.6 2.8e-11 42.1% b.1.6 1.3e-24 86.0% b.1.6 1.3e-28 101.6% b.1.6 1.9e-21 76.5% b.1.6 4.4e-29 103.2% b.1.6 2e-21 75.1%

Sequence

MGPKTLPQLAGKWQVLCMLSLCCWGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKMTDLL
SRRLQLGSEENGRYFSLSLMSGALAVNQKIDRESLCGASTSCLLPVQVVTEHPLELIRVE
VEILDLNDNSPSFATPEREMRISESAASGARFPLDSAQDPDVGTNTVSFYTLSPNSHFSL
NVKTLKDGKPFPELVLEQQLDREAQARHQLVLTAVDGGTPARSGTTLISVIVLDINDNAP
TFQSSVLRVGIPENAPIGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSG
AIHVLGPIDFEESRFYEIHARARDQGQPAMEGHCVIQVDVGDVNDNAPEVLLASLANPVL
ESTPVGTVVGLFNVRDRDSGRNGEVSLDISPDLPFQIKPSENHYSLLTSQPLDREATSHY
IIELLASDAGSPSLHKHLTIRLNISDVNDNAPRFNQQLYTAYILENRPPGSLLCTVAASD
PDTGDNARLTYSIVGNQVQGAPASSFVYVNPEDGRIFAQRTFDYELLQMLQIVVGVRDSG
SPPLHANTSLHVFVLDENDNAPAVLHPRPDWEHSAPQRLPRSAPPGSLVTKVTAVDADAG
HNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTA
TVLLVLEDEDPEEMPKSSDFLIHPPERSDLTLYLIVALATVSLLSLVTFTFLSAKCLQGN
ADGDGGGGQCCRRQDSPSPDFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSP
ASDGSDFTFLRPLSVQQPTALALEPDAIRSRSNTLRERSQQAPPNTDWRFSQAQRPGTSG
SQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHV
PDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK

Region:1-944
Length:944aa
Label:Full sequence
Reset:click