Input sequence

Protein name Protocadherin beta-1
Organism Homo sapiens Length 818
Disorder content 8.6% ProS content 5.3%
IDEAL NA UniProt Q9Y5F3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 818 1-25 26-678 679-681 682-716 717-720 721-780 781-818 26-678 682-716 721-780 1-25 679-681 717-720 781-818 5-25 717-720 795-805 812-818 28-137 143-661 140-661 34-235 31-110 251-338 140-233 577-664 358-442 459-538 29-112 138-233 247-338 352-443 457-553 576-664 198-622 22-312 584-665 29-126 127-234 236-339 341-444 445-554 556-665 344-357 540-553 691-712 690-712 1wyjA(10-119) 1e-28 50.91% 3q2wA(6-538) 2e-21 26.82% 3q2wA(7-538) 6e-75 22.64% 2wcpA(19-207) 2e-28 24.39% PF08266(3-82) 8e-22 57.5% PF00028(5-92) 8e-13 45.56% PF00028(3-92) 4e-10 39.36% PF00028(5-92) 4e-09 32.95% PF00028(7-91) 4e-06 36.36% PF00028(3-77) 2e-05 32.5% PF08266 2.1e-53 188.0% PF00028 1.1e-11 49.5% PF00028 2e-25 95.1% PF00028 7.9e-11 46.6% PF00028 1.1e-14 59.4% PF00028 4.1e-05 27.6% 1dnvA(14-415) 3e-52 7.08% 2nlzA1(254-529) 2e-29 8.22% 1edhA1(13-98) 3e-09 12.79% b.1.6 1.6e-09 35.8% b.1.6 1.3e-29 103.2% b.1.6 1.2e-29 103.4% b.1.6 2.8e-22 78.0% b.1.6 8.1e-28 98.8% b.1.6 8.9e-19 65.9%

Sequence

MAGTRRKSLQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAE
VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL
HTRFCSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVP
QFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS
PPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNI
TIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLD
LGENAQITYSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLN
ILLVDGFSEPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKY
REKFTIQEHFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPF
PHATGEIKMEAGSSLPPNSDRNKSQRLEGHDQVSDDYM

Region:1-818
Length:818aa
Label:Full sequence
Reset:click