Input sequence

Protein name Protocadherin beta-11
Organism Homo sapiens Length 797
Disorder content 4.9% ProS content 4.9%
IDEAL NA UniProt Q9Y5F2

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 797 1-25 26-777 778-787 788-793 794-797 26-777 788-793 1-25 778-787 794-797 1-25 778-787 794-797 22-137 193-660 127-240 140-660 32-235 29-112 576-663 457-552 249-338 352-441 138-233 29-112 138-233 247-338 352-442 456-552 568-663 198-616 27-312 582-664 30-126 127-234 230-380 341-443 444-553 555-664 668-683 690-711 689-711 1wyjA(4-119) 7e-34 58.62% 3q2wA(59-538) 2e-30 25.7% 2ystA(8-119) 4e-08 30.7% 3q2wA(7-538) 3e-94 24.6% 2wcpA(17-207) 7e-26 23.67% PF08266(1-84) 5e-18 50.0% PF00028(5-92) 4e-11 39.77% PF00028(2-92) 2e-09 41.67% PF00028(3-92) 2e-08 40.22% PF00028(1-91) 1e-07 39.56% PF00028(1-92) 5e-05 34.38% PF08266 7.1e-52 182.9% PF00028 3.5e-07 34.5% PF00028 3.8e-20 77.5% PF00028 2.8e-11 48.1% PF00028 4.7e-19 73.9% PF00028 1.2e-08 39.4% 1dnvA(14-408) 7e-61 9.32% 2nlzA1(259-529) 2e-28 7.41% 1edhA1(12-98) 5e-12 11.49% b.1.6 7.5e-09 33.4% b.1.6 3.5e-27 94.8% b.1.6 4.7e-36 124.4% b.1.6 1.5e-22 78.9% b.1.6 1.6e-28 101.2% b.1.6 2.1e-20 71.5%

Sequence

MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS
SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE
LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI
KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP
EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE
ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT
PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT
ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG
KNSEENSTFRNSFGFNF

Region:1-797
Length:797aa
Label:Full sequence
Reset:click