Input sequence

Protein name Sodium channel protein type 8 subunit alpha
Organism Mus musculus Length 1978
Disorder content 24.6% ProS content 18.6%
IDEAL NA UniProt Q9WTU3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1978 1-6 7-30 31-56 57-452 453-692 693-984 985-991 992-1006 1007-1011 1012-1015 1016-1151 1152-1865 1866-1873 1874-1920 1921-1978 7-30 57-452 693-984 992-1006 1012-1015 1152-1865 1874-1920 1-6 31-56 453-692 985-991 1007-1011 1016-1151 1866-1873 1921-1978 1-6 31-39 51-56 453-455 463-472 484-490 505-608 629-663 668-692 1007-1011 1016-1022 1039-1140 1866-1873 1921-1930 1941-1955 1964-1978 1768-1911 1475-1495 160-180 1768-1913 1475-1495 160-180 161-410 1234-1423 1555-1705 785-962 991-1206 503-689 160-410 785-974 989-1206 1232-1461 1554-1763 1894-1914 1515-1602 747-834 1192-1278 174-274 1568-1645 72-419 734-1025 1068-1470 1504-1791 423-452 473-501 606-628 701-712 838-850 878-890 963-985 1060-1071 1139-1151 1292-1307 1436-1452 1617-1629 1738-1756 1953-1972 411-452 129-151 194-216 223-245 255-277 389-411 747-769 782-804 869-891 952-974 1196-1215 1236-1258 1268-1290 1317-1339 1440-1462 1524-1541 1551-1569 1582-1604 1652-1674 1741-1763 4dckA(1-144) 3e-61 77.78% 1byyA(1-21) 8e-05 100.0% 1qg9A(1-21) 0.0005 90.48% 4dckA(1-146) 1e-47 76.71% 1byyA(1-21) 5e-06 100.0% 1qg9A(1-21) 0.0002 90.48% PF00520(2-198) 2e-31 33.59% PF00520(3-170) 4e-28 42.63% PF00520(2-160) 2e-16 40.12% PF00520(1-186) 4e-13 37.43% PF06512(3-219) 3e-30 39.64% PF11933(26-196) 8e-17 39.8% PF00520 1.4e-70 245.1% PF00520 7e-62 216.2% PF06512 5.1e-124 422.6% PF00520 1.6e-75 261.5% PF00520 9.6e-66 229.0% PF00612 3.9e-05 27.6% 1orsC(1-89) 7e-19 11.24% 1orsC(2-89) 6e-14 10.11% 1orsC(2-86) 5e-10 12.64% 2e9xC1(1-103) 4e-14 12.39% 2e9xC1(1-82) 1e-06 12.2% f.14.1 2.9e-29 101.6% f.14.1 1.4e-30 106.2% f.14.1 1.5e-42 147.8% f.14.1 9.4e-38 131.2%

Sequence

MAARVLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTRGF
DWEEYINNKTNFYMVPGMLEPLLCGNSSDAGQCPEGFQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEDGVGSPRSSSEL
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKAFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQCSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGPGSHIGR
LLPEATTEVEIKKKGPGSLLVSMEQLASYGRKDRINSIMSVVTNTLVEELEESQRKCPPC
WYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFE
HVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLADVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKISQECKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWAKVKVHAFMQAH
FKQREADEVKPLDELYEKKANCIANHTGVDIHRNGDFQKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIKPE
VEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTN
AWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIDEVNNKTDCEKLMEG
NNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPDYEGNIYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQF
IEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLARRGFICRKITS
NKLENGGTHREKKESTPSTASLPSYDSVTKPDKEKQQRAEEGRRERAKRQKEVRESKC

Region:1-1978
Length:1978aa
Label:Full sequence
Reset:click