Input sequence

Protein name Semaphorin-6C
Organism Rattus norvegicus Length 960
Disorder content 39.8% ProS content 22.0%
IDEAL NA UniProt Q9WTL3

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 960 1-24 25-456 457-461 462-549 550-554 555-572 573-633 634-663 664-960 25-456 462-549 555-572 634-663 1-24 573-633 664-960 8-24 573-590 597-633 664-692 701-739 747-760 791-807 852-856 896-902 917-923 930-944 955-960 25-543 24-569 72-473 63-490 60-516 39-516 517-543 10-18 589-601 624-655 657-668 676-688 690-699 715-739 773-790 792-802 899-914 936-953 634-656 3afcA(2-506) 5e-144 48.08% 3afcA(1-534) 2e-95 45.85% PF01403(12-405) 1e-90 46.86% PF01403 4.6e-133 452.6% 1olzA2(25-474) 1e-111 32.98% b.69.12 3.4e-138 431.3% g.16.2 1.6e-06 21.2%

Sequence

MPRAPHSMPLLLLLLLSLPQAQTAFPQDPIPLLTSDLQGTSPSSWFRGLEDDAVAAELGL
DFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKFLTWRSQDMENCAVRGKLTDEC
YNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSTVAIS
AEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGDHVYFFFR
EVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ
SLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVS
EDKVPSPRPGSCAGVGAAALFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRA
LLTQVAVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGPEPIILEEIDAYSHARCSG
KRSPRAARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHR
FRGCVNIRGPGGTDVDLTGNQESMEHGDCQDGATGSQSGPGDSAYVLLGPGPSPETPSSP
SDAHPGPQSSTLGAHTQGVRRDLSPASASRSIPIPLLLACVAAAFALGASVSGLLVSCAC
RRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPPPPKDGDAAQTPQLYTTFLPPPEG
GSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGNNASEGPGRPRGCSAAGGPAPRVL
VRPPPPGCPGQEVEVTTLEELLRYLHGPQPPRKGSEPLASAPFTSRPPASEPGAALFVDS
SPMPRDCVPPLRLDVPPDGKRAAPSGRPALSAPAPRLGVSGSRRLPFPTHRAPPGLLTRV
PSGGPSRYSGGPGRHLLYLGRPDGHRGRSLKRVDVKSPLSPKPPLATPPQPAPHGSHFNF

Region:1-960
Length:960aa
Label:Full sequence
Reset:click