Input sequence

Protein name Opsin-1, short-wave-sensitive 1
Organism Danio rerio Length 336
Disorder content 7.1% ProS content 0.0%
IDEAL NA UniProt Q9W6A9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 336 1-229 230-236 237-319 320-336 1-229 237-319 230-236 320-336 6-196 284-306 1-292 280-314 48-299 47-299 4-318 14-333 240-255 321-335 32-54 67-89 104-126 146-168 195-217 247-269 279-301 1f88A(11-203) 1e-11 23.83% 1fdfA(1-23) 0.0004 73.91% 1f88A(1-295) 3e-36 22.74% 2z73A(288-322) 5e-07 31.43% PF00001(1-253) 1e-17 26.36% PF00001 9.6e-55 192.5% 1f88A(9-321) 9e-27 42.9% f.13.1 1.5e-73 245.1%

Sequence

MDAWAVQFGNASKVSPFEGEQYHIAPKWAFYLQAAFMGFVFIVGTPMNGIVLFVTMKYKK
LRQPLNYILVNISLAGFIFDTFSVSQVFVCAARGYYFLGYTLCAMEAAMGSIAGLVTGWS
LAVLAFERYVVICKPFGSFKFGQGQAVGAVVFTWIIGTACATPPFFGWSRYIPEGLGTAC
GPDWYTKSEEYNSESYTYFLLITCFMMPMTIIIFSYSQLLGALRAVAAQQAESESTQKAE
REVSRMVVVMVGSFVLCYAPYAVTAMYFANSDEPNKDYRLVAIPAFFSKSSCVYNPLIYA
FMNKQFNACIMETVFGKKIDESSEVSSKTETSSVSA

Region:1-336
Length:336aa
Label:Full sequence
Reset:click