Input sequence

Protein name Opsin-1, short-wave-sensitive 2
Organism Danio rerio Length 354
Disorder content 10.7% ProS content 5.6%
IDEAL NA UniProt Q9W6A8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 354 1-11 12-20 21-25 26-332 333-354 12-20 26-332 1-11 21-25 333-354 8-11 21-25 344-354 113-265 298-322 12-306 62-313 61-313 12-331 10-354 100-112 171-181 339-350 48-70 82-104 124-146 159-181 209-231 262-284 294-316 1f88A(106-254) 8e-16 32.03% 1fdfA(1-25) 0.001 64.0% 1f88A(7-295) 6e-37 24.07% PF00001(1-253) 8e-19 30.45% PF00001 1.3e-55 195.3% 1f88A(7-320) 2e-21 46.25% f.13.1 3.7e-79 264.0%

Sequence

MKQQQQTPELFEDFHMPITLDVSNISAYSPFLVPQDHLGHSGVFMGMSAFMLFLFIAGTA
INVLTIVCTIQYKKLRSHLNYILVNLAISNLWVSVFGSSVAFYAFYKKYFVFGPIGCKIE
GFTSTIGGMVSLWSLAVVALERWLVICKPLGNFTFKTPHAIAGCILPWCMALAAGLPPLL
GWSRYIPEGLQCSCGPDWYTTNNKFNNESYVMFLFCFCFAVPFSTIVFCYGQLLITLKLA
AKAQADSASTQKAEREVTKMVVVMVFGFLICWGPYAIFAIWVVSNRGAPFDLRLATIPSC
LCKASTVYNPVIYVLMNKQFRSCMMKMVFNKNIEEDEASSSSQVTQVSSVAPEK

Region:1-354
Length:354aa
Label:Full sequence
Reset:click