Input sequence

Protein name Probable nucleoporin C890.06
Organism Schizosaccharomyces pombe Length 1315
Disorder content 8.4% ProS content 2.4%
IDEAL NA UniProt Q9URX8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:SCOP SEG:LCR 0 1315 1-15 16-350 351-355 356-360 361-376 377-382 383-409 410-454 455-461 462-531 532-536 537-575 576-620 621-696 697-701 702-707 708-1047 1048-1053 1054-1085 1086-1089 1090-1153 1154-1158 1159-1263 1264-1271 1272-1315 16-350 361-376 410-454 462-531 537-575 621-696 708-1047 1054-1085 1090-1153 1159-1263 1272-1315 1-15 356-360 383-409 455-461 532-536 576-620 702-707 388-394 408-409 532-536 576-577 588-597 702-707 817-1259 56-808 19-808 817-1265 61-513 688-1144 9-1308 99-359 351-367 3i5pA(1-404) 2e-53 29.75% 4mhcA(45-670) 5e-48 24.44% 4mhcA(4-670) 1e-123 22.39% 3i5pA(1-410) 1e-100 27.81% PF08801(4-404) 2e-55 32.17% PF03177(18-474) 5e-45 31.73% PF03177 9.5e-150 508.1% b.68.9 1.2e-07 22.6%

Sequence

MDINDPSFSSTENGIYELLSRGYAAIEAATERDLKLPELGDIIGQVHAPEYISQVLSGWK
PFYLRSVVNIPDRIFEQYNRTECFTQMGLFAEIQRAWITVDNRLFLWDYLSGQNFQAYED
LSHTIVNVKLVRPKANVFVSEIQHLLVIATSQEMLLLGVTIDEKTGELSFFSTGIQISVQ
GINVNCIVSSEDGRIFFSGNKDPNLYEFSYQLEEGWFSRRCSKINITGSVFDNFIPSFFS
FGTHGDGIKQIAVDDSRSLLYVLRETSSVSCYELTKNGVNRCVFYSFSSMISQAQMLNAT
SPLLDPRTTQIVSIVPIPAYESQQIYCVAITSTGCRFYMRGGRGPISHYAPSNSTLSSTP
PSTLQLTFVRFPPPMQVENYASSRNYPANPFFLQNQSTSQQQPERSSAVKTTPMKCSSLS
NIYTSDLFFAISSSNTNEGDVVCCTAPEVGRIANAWQSGTQPSLIESSMYVPIKGFVQDI
KCIQNSRERNELVSQFNTPPPTFAILTNTGVYVVVHRRPIDVLASAIRMGPSLSSGIDGQ
VQLFFESVGRAEGCATCLGIVSGCLDQGDFSHAAANFSGSTTKLAQADLLDIVKKYYIEF
GGKAFIDQSRYNNQYDSSSLEFVRLSGCHDGLASSISRIIRNVWKNHVIIAKKMQNKRIH
YAPAFNATEILKIQSGLLYLSTFLENNKSFIEGLNSPNTLIGSSNVADEIAVQAEHRALS
ALLLVLQQIVEGISFLLFLNDTGVSDFHEIVSSTSIDIQKSCSNMTFGEFFTSKRGREVT
KELVNSLVNRHLQSGGNIDMVSQLLRKKCGSFCSADDVLIFKAVESLKKAKDTVDIEERQ
SLIELSYTLFKKAAHVFTPEDLRLAVEEYKSLNAYTTAVNLALHVASARDDRNQALSYLV
DGMPENDPRREPFESRTKCYSYIFEILDSLESQMSNDSSAIKVDVYDTIQRSKDELFHYC
FYDWYSFKGLTDRLIEIDSPYIQSYLERNSTKDMKIADLLWQYYAKREQYYQASIVLYDL
ATTHLAFSLEQRIEYLTRAKGFGSCHVPNSLRHKMNKVMLSVLEQLDVASIQDDVLIAIR
GDMRIPTSKREELSKQLDGEIIPLSDLFNNYADPLGYGEICLSIFQCADYRGINEILNCW
ESIIKTTHENAIISPVGSSPVEAVSSTLKNLTLRFSQSENVFPIEQIIDITERYAFDQQG
EAVATGWVIDTFLGAGVSHELIFIVLNQLYDRREKPWQGKDRLFFLIKEVTHLLKLWHEV
SVRAGVAQTSKPSFDAPLVLEAIEKYKNALGAPDTATKSCKENLISLDSEIRQTY

Region:1-1315
Length:1315aa
Label:Full sequence
Reset:click