Input sequence

Protein name Sodium channel protein type 8 subunit alpha
Organism Homo sapiens Length 1980
Disorder content 26.1% ProS content 18.9%
IDEAL NA UniProt Q9UQD0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1980 1-7 8-23 24-78 79-452 453-699 700-985 986-991 992-1022 1023-1152 1153-1866 1867-1874 1875-1916 1917-1980 8-23 79-452 700-985 992-1022 1153-1866 1875-1916 1-7 24-78 453-699 986-991 1023-1152 1867-1874 1917-1980 1-7 24-42 52-78 488-497 507-527 536-608 623-698 1041-1113 1123-1142 1871-1874 1917-1931 1943-1959 1968-1980 1770-1913 1477-1497 160-180 1770-1915 1477-1497 160-180 161-410 1236-1425 1557-1707 787-964 993-1208 503-691 160-410 787-976 991-1208 1234-1463 1556-1765 1896-1916 1517-1604 749-836 1194-1280 174-274 1570-1647 72-419 736-1027 1070-1472 1506-1793 423-452 464-501 610-628 703-714 840-852 880-892 965-987 1062-1073 1141-1153 1294-1309 1438-1454 1619-1631 1740-1758 1954-1974 411-452 129-151 194-216 223-245 255-277 389-411 749-771 784-806 871-893 954-976 1198-1217 1238-1260 1270-1292 1319-1341 1442-1464 1526-1543 1553-1571 1584-1606 1654-1676 1743-1765 4dckA(1-144) 3e-61 77.78% 1byyA(1-21) 8e-05 100.0% 1qg9A(1-21) 0.0005 90.48% 4dckA(1-146) 1e-47 76.71% 1byyA(1-21) 5e-06 100.0% 1qg9A(1-21) 0.0002 90.48% PF00520(2-198) 1e-31 33.98% PF00520(3-170) 1e-27 42.11% PF00520(2-160) 2e-16 40.12% PF00520(1-186) 3e-12 36.9% PF06512(3-219) 2e-30 39.64% PF11933(26-196) 2e-16 39.8% PF00520 6.8e-71 246.1% PF00520 3.5e-62 217.2% PF06512 2.2e-122 417.2% PF00520 9.8e-75 258.9% PF00520 9.6e-66 229.0% PF00612 3.9e-05 27.6% 1orsC(1-89) 7e-19 11.24% 1orsC(2-89) 2e-13 10.11% 1orsC(2-86) 5e-10 12.64% 2e9xC1(1-103) 5e-14 12.39% 2e9xC1(1-82) 1e-06 12.2% f.14.1 9.9e-30 103.2% f.14.1 1.7e-30 105.9% f.14.1 1.3e-42 148.1% f.14.1 9.4e-38 131.2%

Sequence

MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWEEYINNKTNFYTVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGGGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKAFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIG
GRLLPEATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSIMSVVTNTLVEELEESQRKCP
PCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQ
FEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGL
SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKS
YKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMV
MVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTKLKVHAFMQ
AHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSGIGSSVEKYIID
EDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIK
PEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCFLIVEHNWF
ETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFF
TNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNAL
VGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIEDVNNKTECEKLM
EGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYM
YIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKP
QKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLV
FVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIR
LARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEA
GIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPS
VGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDAT
QFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSG
ELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLARRGFICKKT
TSNKLENGGTHREKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKEVRESKC

Region:1-1980
Length:1980aa
Label:Full sequence
Reset:click