Input sequence

Protein name HERV-H LTR-associating protein 2
Organism Homo sapiens Length 414
Disorder content 18.6% ProS content 10.9%
IDEAL NA UniProt Q9UM44

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 414 1-6 7-178 179-183 184-235 236-243 244-247 248-252 253-336 337-345 346-365 366-414 7-178 184-235 244-247 253-336 346-365 1-6 179-183 236-243 337-345 366-414 1-6 236-243 343-345 366-379 401-414 36-227 36-227 157-317 31-139 144-222 224-335 157-225 237-322 30-138 113-227 223-337 7-20 7-29 346-365 4i0kA(1-198) 5e-15 31.86% 4i0kA(1-198) 2e-17 27.72% 2yd5A(23-178) 3e-07 16.11% PF07686 0.00079 20.3% PF07654 0.0007 10.0% PF07686 1.1e-15 62.7% 1dr9A2(21-92) 8e-08 22.22% 1nkoA(20-103) 0.0007 13.95% b.1.1 9.8e-16 50.4% b.1.1 6.7e-12 41.1% b.1.1 3.4e-11 37.7%

Sequence

MKAQTALSFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV
IHWKYQDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYT
CYVGTAIQVITNKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWKMDNTPIS
ENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQSEHVS
LSCQPVNDYFSPNQDFKVTWSRMKSGTFSVLAYYLSSSQNTIINESRFSWNKELINQSDF
SMNLMDLNLSDSGEYLCNISSDEYTLLTIHTVHVEPSQETASHNKGLWILVPSAILAAFL
LIWSVKCCRAQLEARRSRHPADGAQQERCCVPPGERCPSAPDNGEENVPLSGKV

Region:1-414
Length:414aa
Label:Full sequence
Reset:click