Input sequence

Protein name Pre-mRNA-processing-splicing factor 8B
Organism Arabidopsis thaliana Length 2359
Disorder content 3.9% ProS content 2.2%
IDEAL NA UniProt Q9T0I6

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP SEG:LCR COILS:coiledCoil 0 2359 1-78 79-2057 2058-2062 2063-2066 2067-2351 2352-2359 79-2057 2067-2351 1-78 2058-2062 2352-2359 1-16 50-78 2352-2359 839-2344 836-2344 652-757 418-823 1786-2016 1468-1627 1236-1369 80-231 2238-2356 1011-1101 80-231 418-826 2125-2228 2237-2358 1787-2039 172-197 1015-1026 1070-1080 868-895 4i43B(6-1407) 0.0 58.94% 4i43B(3-1407) 0.0 58.8% 3cbtA(96-201) 2e-07 22.12% PF08083(1-405) 0.0 89.16% PF12134(1-231) 2e-123 86.58% PF10596(1-160) 1e-93 95.62% PF10597(2-135) 2e-68 89.55% PF08082(1-152) 1e-58 86.84% PF08084(2-123) 2e-46 64.75% PF10598(1-91) 8e-23 71.43% PF08082 2.9e-118 403.5% PF08083 0.0 1094.2% PF01398 6.2e-14 56.9% PF08084 5.6e-85 292.9% 3e66A1(1-253) 8e-131 68.77%

Sequence

MWNIDGTSLAPPGTDGSRMQTPSHPADHPSYTAPSNRNTPTVPTPEDAEAKLEKKARTWM
QLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKHRLDKRVYLGALKFVPHA
VFKLLENMPMPWEQVRDVKVLYHITGAITFVNEVRWVVEPIYMAQWGSMWIMMRREKRDR
RHFKRMRFPPFDDEEPPLDYADNLLDVDPLEAIQLELDEEEDSAVYSWFYDHKPLVKTKM
INGPSYQTWNLSLPIMSTLHRLAAQLLSDLVDRNYFYLFDMPSFFTAKALNMCIPGGPKF
EPLHRDMEKGDEDWNEFNDINKLIIRSPLRTEYKVAFPHLYNNRPRKVKLCVYHTPMVMY
IKTEDPDLPAFYYDPLIHPISNSNNTNKEQRKSNGYDDDGDDFVLPEGLEPLLNNSPLYT
DTTAPGISLLFAPRPFNMRSGRTRRAEDIPLVAEWFKEHCPPAYPVKVRVSYQKLLKCYL
LNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGLQVCRQGYNMLNLLIHRKNLNY
LHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLA
DGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWR
VWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVVD
AMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVAIENMILRYVKSKADWWTNVAH
YNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNFQKDGPYVTADEGIAIYSTTVN
WLESRKFSAIPFPPLSYKHDTKLLILALERLKESYSAAVKLNQQQREELGLIEQAYDNPH
EALMRIKRHLLTQHSFKEVGIEFMDLYSHLIPVYQIDPLEKITDAYLDQYLWYEGDKRHL
FPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTSDGQCVVMLQTKFEKLFEKIDLTVLNS
LLRLVLDPKLANYVTGKNNVVLSYKDMSYTNTYGLIRGLQFASFVVQFYGLVLDLLLLGL
TRASEIAGPPQRPNEFMTYWDTKVETRHPIRLYSRYIDKVHIMFKFTHEEARDLIQRHLT
ERPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENGFV
SVYSKDNPNLLFSMCGFEVRVLPKIRMGQEAFSSTRDGVWNLQNEQTKERTAVAFLRADD
EHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENK
IQTRVKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSNQTDVGVSHFR
SGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDR
GIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQALKQNPFWWTHQRHDGKLWNLNNYRTDV
IQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRF
TLWWSPTINRANVYVGFQVQLDLTGIYMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLC
QVLDQELEPLEIETVQKETIHPRKSYKMNSSCADVLLFAAHKWPMSKPSLIAESKDVFDQ
KASNKYWIDVQLRWGDYDSHDIERYTKAKFMDYTTDNMSIYPSPTGVIIGLDLAYNLHSA
FGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSN
QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGVIFIFNPRTGQLFLKIIHTSVWAGQKRLG
QLAKWKTAEEVAALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQ
ACLKIEKFGDLILKATEPQMALFNIYDDWLMTVSSYTAFQRLILILRALHVNNEKAKMLL
KPDMSVVTEPNHIWPSLTDDQWMKVEVALRDLILSDYAKKNKVNTSALTQSEIRDIILGA
EITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELISTTISPYEQSAFGSKTDWR
VRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAGYLYGISPP
DNPQVKEIRCVVMVPQCGNHQQVQLPSSLPEHQFLDDLEPLGWIHTQPNELPQLSPQDVT
FHTRVLENNKQWDAEKCIILTCSFTPGSCSLTSYKLTQAGYEWGRLNKDTGSNPHGYLPT
HYEKVQMLLSDRFFGFYMVPENGPWNYNFMGANHTVSINYSLTLGTPKEYYHQVHRPTHF
LQFSKMEEDGDLDRDDSFA

Region:1-2359
Length:2359aa
Label:Full sequence
Reset:click