Input sequence

Protein name Pentatricopeptide repeat-containing protein At4g20740
Organism Arabidopsis thaliana Length 727
Disorder content 10.2% ProS content 5.2%
IDEAL NA UniProt Q9SVH3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 727 1-74 75-727 75-727 1-74 15-40 58-69 161-445 334-658 91-678 229-263 264-298 299-333 334-368 404-438 508-542 543-577 232-437 492-679 407-549 129-359 368-604 73-79 4wslA(6-290) 9e-41 33.68% 4wslA(4-293) 4e-29 27.44% 4m57A(4-601) 6e-51 16.1% PF01535 0.00056 23.8% PF01535 3e-09 41.3% PF01535 2.5e-08 38.3% PF01535 8.4e-06 29.9% PF01535 1.4e-05 29.1% PF01535 2.1e-09 41.9% PF01535 0.00083 23.3% 2fsqA1(2-203) 3e-22 7.66% 2fsqA1(17-200) 5e-16 7.33% 1nnvA(2-105) 4e-06 9.66% a.118.8 2.2e-13 44.9% a.118.8 3.7e-13 44.1%

Sequence

MKSPKPPNLSDKSLKPNFFHGHRKPSQNRPTVYGGLFSNRQSIPRVSPQPQSNSLAHRTP
FDLRKWDPETHLPPPSPPSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKL
RRVTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL
PELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVK
NGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFA
YTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMK
GKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD
KAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFK
LLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEP
DSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLV
RECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSK
HGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGLESKLRAK
GCRLLDN

Region:1-727
Length:727aa
Label:Full sequence
Reset:click