Input sequence

Protein name Pentatricopeptide repeat-containing protein At4g08210
Organism Arabidopsis thaliana Length 686
Disorder content 2.0% ProS content 2.0%
IDEAL NA UniProt Q9SUF9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 686 1-672 673-686 1-672 673-686 673-686 16-235 391-620 140-439 43-606 1-81 546-671 72-106 174-208 510-544 483-686 44-266 177-423 381-550 50-337 305-684 318-331 4wslA(14-245) 5e-21 30.04% 4wslA(52-285) 1e-19 30.25% 4wslA(1-279) 4e-15 25.48% 4m57A(72-662) 5e-52 16.64% 4pjrA(88-172) 0.0007 27.06% 3spaA(8-140) 9e-07 15.04% PF01535 2.6e-06 31.6% PF01535 3e-08 38.0% PF01535 3.6e-10 44.4% 2fsqA1(3-209) 9e-39 9.95% 2fsqA1(2-220) 7e-22 9.87% 2fsqA1(2-214) 2e-12 5.91% 2fsqA1(2-210) 3e-11 8.57% a.118.8 7.4e-14 46.5% a.118.8 3.9e-30 97.2%

Sequence

MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH
KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV
GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI
SGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFA
LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK
LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL
GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK
SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT
ATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGI
EPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEAN
ELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLG
MWDQLSKVREAAKKLGAKESGMSWII

Region:1-686
Length:686aa
Label:Full sequence
Reset:click