Input sequence

Protein name Probable cyclic nucleotide-gated ion channel 16
Organism Arabidopsis thaliana Length 705
Disorder content 18.2% ProS content 11.5%
IDEAL NA UniProt Q9SU64

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 705 1-36 37-613 614-705 37-613 1-36 614-705 1-36 614-614 624-634 656-678 696-705 452-575 389-508 446-575 387-479 98-374 475-575 387-586 315-380 46-394 382-590 619-638 642-656 57-79 148-167 182-199 220-242 1wgpA(8-131) 9e-46 70.97% 4d7sA(8-127) 5e-10 27.5% 1wgpA(2-131) 1e-34 67.69% 3ukvD(3-93) 2e-07 20.43% PF00520 1e-14 59.5% PF00027 1.7e-07 35.5% 1q3eA(6-188) 4e-22 21.0% 1bl8A(30-94) 3e-05 13.64% f.14.1 1.8e-27 95.4% b.82.3 3.4e-39 136.5%

Sequence

MSNLHLYTSARFRNFPTTFSLRHHHNDPNNQRRRSIFSKLRDKTLDPGGDLITRWNHIFL
ITCLLALFLDPLYFYLPIVQAGTACMSIDVRFGIFVTCFRNLADLSFLIHILLKFKTAFV
SKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQN
HTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYV
LSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGSLHDPGRQAWMRITRVLSNCDARNDD
DQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTLSSETIFSCFIC
VAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQERVRRFVQYKW
LTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTK
DTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNIN
HNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRRLHSKKLQHAFRYYSHQWRAWGTCFI
QAAWRRYMKRKLAMELARQEEEDDYFYDDDGDYQFEEDMPESNNNNGDENSSNNQNLSAT
ILASKFAANTKRGVLGNQRGSTRIDPDHPTLKMPKMFKPEDPGFF

Region:1-705
Length:705aa
Label:Full sequence
Reset:click