Input sequence

Protein name Lysine-specific demethylase REF6
Organism Arabidopsis thaliana Length 1360
Disorder content 46.4% ProS content 32.9%
IDEAL NA UniProt Q9STM3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1360 1-11 12-56 57-103 104-183 184-198 199-521 522-725 726-860 861-876 877-884 885-895 896-900 901-1213 1214-1346 1347-1360 12-56 104-183 199-521 726-860 877-884 896-900 1214-1346 1-11 57-103 184-198 522-725 861-876 885-895 901-1213 1347-1360 8-11 57-70 81-103 522-597 606-725 861-871 885-895 901-917 939-944 960-977 982-1005 1011-1027 1032-1037 1049-1060 1079-1121 1126-1132 1143-1148 1173-1187 1196-1203 1347-1356 18-383 1245-1356 18-435 1243-1348 234-351 21-52 21-62 233-352 1326-1352 132-365 1243-1353 1278-1324 1314-1352 53-59 66-79 120-131 184-199 479-490 853-874 1060-1069 1224-1239 1214-1253 5a1fA(7-330) 3e-38 31.27% 2gliA(4-127) 5e-15 32.8% 5a1fA(7-383) 1e-57 27.55% 2gliA(35-151) 8e-23 28.21% PF02373(2-113) 1e-19 42.37% PF02375(1-32) 2e-06 65.62% PF02375 9.3e-08 36.4% PF02373 5e-56 196.7% PF00096 0.00045 24.1% 1h2kA(63-294) 3e-17 9.05% 1k2fA(67-174) 4e-12 9.01% g.37.1 2.4e-12 41.7% g.37.1 2.9e-07 31.0%

Sequence

MAVSEQSQDVFPWLKSLPVAPEFRPTLAEFQDPIAYILKIEEEASRYGICKILPPLPPPS
KKTSISNLNRSLAARAAARVRDGGFGACDYDGGPTFATRQQQIGFCPRKQRPVQRPVWQS
GEEYSFGEFEFKAKNFEKNYLKKCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSA
FIPLSLAAARRRESGGEGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYVAMMF
SWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAALAFEEVVRVHGYGEELNPLVTFSTLG
EKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWLRM
AKDAAIRRAAINYPPMVSHLQLLYDFVLALGSRVPTSINPKPRSSRLKDKARSEGERLTK
KLFVQNIIHNNELLSSLGKGSPVALLPQSSSDISVCSDLRIGSHLITNQENPIQLKCEDL
SSDSVVVDLSNGLKDTVSVKEKFTSLCERSRNHLASTEKDTQETLSDAERRKNDAAVALS
DQRLFSCVTCGVLSFDCVAIVQPKEAAARYLMSADCSFFNDWTAASGSANLGQAARSLHP
QSKEKHDVNYFYNVPVQTMDHSVKTGDQKTSTTSPTIAHKDNDVLGMLASAYGDSSDSEE
EDQKGLVTPSSKGETKTYDQEGSDGHEEARDGRTSDFNCQRLTSEQNGLSKGGKSSLLEI
ALPFIPRSDDDSCRLHVFCLEHAAEVEQQLRPFGGINLMLLCHPEYPRIEAEAKIVAEEL
VINHEWNDTEFRNVTREDEETIQAALDNVEAKGGNSDWTVKLGVNLSYSAILSRSPLYSK
QMPYNSIIYKAFGRSSPVASSPSKPKVSGKRSSRQRKYVVGKWCGKVWMSHQVHPFLLEQ
DLEGEESERSCHLRVAMDEDATGKRSFPNNVSRDSTTMFGRKYCRKRKIRAKAVPRKKLT
SFKREDGVSDDTSEDHSYKQQWRASGNEEESYFETGNTASGDSSNQMSDPHKGIIRHKGY
KEFESDDEVSDRSLGEEYTVRACAASESSMENGSQHSMYDHDDDDDDIDRQPRGIPRSQQ
TRVFRNPVSYESEDNGVYQQSGRISISNRQANRMVGEYDSAENSLEERGFCSTGKRQTRS
TAKRIAKTKTVQSSRDTKGRFLQEFASGKKNEELDSYMEGPSTRLRVRHQKPSRGSLETK
PKKIGKKRSGNASFSRVATEKDVEEKEEEEEEEENEEEECAAYQCNMEGCTMSFSSEKQL
MLHKRNICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVH
TGARPYVCAEPDCGQTFRFVSDFSRHKRKTGHSVKKTNKR

Region:1-1360
Length:1360aa
Label:Full sequence
Reset:click