Input sequence

Protein name Pentatricopeptide repeat-containing protein At1g52620
Organism Arabidopsis thaliana Length 819
Disorder content 4.0% ProS content 1.7%
IDEAL NA UniProt Q9SSR4

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 819 1-29 30-815 816-819 30-815 1-29 816-819 4-13 816-819 347-635 554-743 219-425 140-287 83-748 697-806 9-103 171-205 241-275 276-310 346-380 381-415 416-450 451-485 486-520 521-555 556-590 591-625 711-745 385-611 524-767 244-461 76-290 386-739 175-186 4wslA(5-293) 4e-52 38.06% 4ozsA(1-175) 3e-20 32.11% 4pjrA(1-172) 8e-25 32.85% 4pjrA(28-174) 1e-15 34.46% 4m57A(23-674) 1e-62 17.99% 3spaA(31-140) 1e-08 15.45% 2y26A(308-389) 2e-06 25.26% PF01535 6.8e-05 26.9% PF01535 8.2e-10 43.2% PF01535 1e-06 32.9% PF01535 3.6e-07 34.4% PF01535 2.7e-07 34.8% PF01535 1.1e-06 32.8% PF01535 1.8e-07 35.4% PF01535 1.3e-07 35.8% PF01535 9e-10 43.1% PF01535 5.5e-09 40.5% PF01535 5.7e-12 50.4% PF01535 3.3e-05 27.9% 2fsqA1(3-227) 1e-29 8.19% 2fsqA1(2-228) 6e-23 7.63% 2fsqA1(2-215) 2e-22 7.24% 2fsqA1(13-221) 2e-12 7.76% a.118.8 5.6e-23 78.6%

Sequence

MSKTLLSRIKPLSNPHASNSFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEE
VRFVDISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIED
VLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLL
VKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI
VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE
VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK
KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI
LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN
ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL
ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF
CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN
EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL
CVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVA
VRYSQVLEQHLPQPVICEASTILHAMVEKADTKEPVESP

Region:1-819
Length:819aa
Label:Full sequence
Reset:click