Input sequence

Protein name Putative pentatricopeptide repeat-containing protein At3g08820
Organism Arabidopsis thaliana Length 685
Disorder content 1.5% ProS content 1.5%
IDEAL NA UniProt Q9SR82

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 685 1-10 11-685 11-685 1-10 1-10 151-423 378-548 74-211 177-492 75-240 532-653 178-212 279-313 349-383 352-579 151-379 521-667 80-183 156-538 594-613 4wslA(8-292) 4e-28 29.51% 4ozsA(1-174) 2e-11 26.97% 4pjrA(20-161) 5e-14 30.28% 4wslA(3-293) 2e-36 26.3% 4ozsA(1-170) 2e-24 27.06% 1gqaA(3-127) 5e-10 12.8% PF01535 1.3e-11 49.2% PF01535 1e-09 42.9% PF01535 0.00011 26.2% 2fsqA1(2-231) 1e-42 7.23% 2fsqA1(3-200) 2e-20 5.88% 1ug9A4(3-135) 2e-35 10.53% 1nnvA(2-104) 2e-07 8.57% a.118.8 2.7e-32 111.4%

Sequence

MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ
TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA
CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW
TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE
MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL
FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK
CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL
LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP
NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD
MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF
VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR
REIVVRDNNRFHCFTNGSCSCNDYW

Region:1-685
Length:685aa
Label:Full sequence
Reset:click