Input sequence

Protein name Nuclear cap-binding protein subunit 1
Organism Arabidopsis thaliana Length 848
Disorder content 7.5% ProS content 5.3%
IDEAL NA UniProt Q9SIU2

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 848 1-261 262-266 267-270 271-274 275-685 686-708 709-751 752-783 784-848 1-261 275-685 709-751 784-848 262-266 271-274 686-708 752-783 262-266 271-274 691-708 758-764 773-783 5-639 5-644 500-679 312-466 8-228 5-274 295-478 482-633 2-295 290-479 480-847 379-394 707-723 727-745 637-685 1h2tC(4-609) 3e-69 28.66% 1h2tC(4-614) 3e-136 28.17% PF09090(13-195) 8e-31 41.3% PF09088(8-175) 1e-30 41.07% PF02854 9.6e-42 149.3% 1h2tC1(4-254) 4e-65 28.15% 1h2tC2(6-189) 9e-23 33.33% 1h2tC3(3-151) 7e-12 25.66% a.118.1 2.3e-81 259.1% a.118.1 1.8e-64 220.8% a.118.1 5.7e-80 269.6%

Sequence

MSNWKTLLLRIGEKGPEYGTSSDYKDHIETCFGVIRREIERSGDQVLPFLLQCAEQLPHK
IPLYGTLIGLLNLENEDFVQKLVESVHANFQVALDSGNCNSIRILLRFMTSLLCSKVIQP
ASLIVVFETLLSSAATTVDEEKGNPSWQPQADFYVICILSSLPWGGSELAEQVPDEIERV
LVGIQAYLSIRKNSSTSGLNFFHNGEFESSLAEKDFVEDLLDRIQSLASNGWKLESVPRP
HLSFEAQLVAGKFHELRPIKCMEQPSPPSDHSRAYSGKQKHDALTRYPQRIRRLNIFPAN
KMEDVQPIDRFVVEEYLLDVLFYLNGCRKECASYMANLPVTFRYEYLMAETLFSQILLLP
QPPFKTLYYTLVIMDLCKALPGAFPAVVAGAVRALFEKISDLDMESRTRLILWFSHHLSN
FQFIWPWEEWAFVLDLPKWAPKRVFVQEILQREVRLSYWDKIKQSIENATALEELLPPKA
GPNFMYSLEEGKEKTEEQQLSAELSRKVKEKQTARDMIVWIEETIYPVHGFEVTLTIVVQ
TLLDIGSKSFTHLVTVLERYGQVFSKLCPDNDKQVMLLSQVSTYWKNNVQMTAVAIDRMM
GYRLVSNQAIVRWVFSPENVDQFHVSDQPWEILGNALNKTYNRISDLRKDISNITKNVLV
AEKASANARVELEAAESKLSLVEGEPVLGENPAKMKRLKSTVEKTGEAELSLRESLEAKE
ALLNRALSETEVLLLLLFQSFLGVLKERLPDPTKVRSVQDLKSIGAEDDKPSAMDVDSEN
GNPKKSCEVGEREQWCLSTLGYLTAFTRQYASEIWPHMEKLESEVFSGEDVHPLFLQAIS
SALQFPLH

Region:1-848
Length:848aa
Label:Full sequence
Reset:click