Input sequence

Protein name Casparian strip membrane protein 1
Organism Arabidopsis thaliana Length 206
Disorder content 30.6% ProS content 12.6%
IDEAL NA UniProt Q9SIH4

Prediction

Order Disorder ProS RPS-BLAST:Pfam HMMER:Pfam SEG:LCR TMHMM:TMhelix 0 206 1-49 50-117 118-128 129-203 204-206 50-117 129-203 1-49 118-128 204-206 6-10 43-49 118-128 204-206 44-182 42-191 14-25 73-84 97-111 144-149 186-203 50-69 95-117 129-151 181-203 PF04535(2-138) 1e-06 35.21% PF04535 2.9e-63 220.8%

Sequence

MAKESTTIDVGEPSTVTKSSSHVVKDAKKKGFVAVASRGGAKRGLAIFDFLLRLAAIAVT
IGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVR
PHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVST
AVVADSIAILFFIVLIIISAIALKRH

Region:1-206
Length:206aa
Label:Full sequence
Reset:click