Input sequence

Protein name Pentatricopeptide repeat-containing protein At2g22070
Organism Arabidopsis thaliana Length 786
Disorder content 0.0% ProS content 0.0%
IDEAL NA UniProt Q9SHZ8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 786 1-786 1-786 313-591 110-379 42-156 529-701 42-644 599-754 112-146 244-278 379-413 481-515 452-680 185-415 84-269 623-768 382-518 39-118 48-352 313-641 7-20 416-430 4wslA(2-291) 2e-25 29.21% 4wslA(2-280) 1e-19 23.57% 4wslA(171-293) 4e-07 24.39% 4pjrA(1-164) 2e-06 25.56% 4m57A(64-663) 3e-51 16.43% 1aa7A(1-156) 6e-18 12.18% PF01535 1.1e-07 36.1% PF01535 9e-05 26.4% PF01535 5.6e-08 37.1% PF01535 8.4e-11 46.5% 2fsqA1(2-231) 2e-47 7.66% 2fsqA1(2-206) 4e-19 5.53% 2fsqA1(2-195) 4e-18 7.69% 1ug9A4(4-135) 3e-42 7.95% 1nnvA(2-101) 1e-07 9.22% 1nnvA(23-105) 0.0002 10.59% a.118.8 1.5e-18 59.0% a.118.8 3.7e-33 114.5%

Sequence

MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYS
KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG
YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN
VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE
RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ
IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL
GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML
SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT
VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM
MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID
LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK
HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE
KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC
SCRDYW

Region:1-786
Length:786aa
Label:Full sequence
Reset:click