Input sequence

Protein name Transcriptional repressor CTCF
Organism Rattus norvegicus Length 737
Disorder content 54.5% ProS content 38.7%
IDEAL NA UniProt Q9R1D1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 737 1-258 259-593 594-737 259-593 1-258 594-737 7-28 37-41 49-77 88-119 138-142 153-181 187-195 202-258 594-645 660-670 679-687 692-699 721-737 515-589 399-462 277-425 469-546 277-425 373-546 513-589 266-288 294-316 322-345 351-373 379-401 437-460 523-546 555-577 266-577 276-320 318-374 375-432 433-489 491-546 554-584 116-131 202-211 250-264 592-606 623-658 701-722 1x6hA(8-82) 9e-42 98.67% 2ct1A(8-71) 1e-34 100.0% 2i13A(3-147) 2e-28 37.58% 2rsjA(12-88) 4e-13 42.31% 2i13A(3-147) 3e-38 37.58% 2dlqA(2-118) 6e-29 23.56% 1x6hA(6-82) 1e-30 96.1% PF00096 1.2e-05 29.4% PF00096 6e-05 27.1% PF00096 7e-06 30.1% PF00096 0.00053 23.9% PF00096 0.00013 26.0% PF00096 0.00075 23.4% PF00096 0.00031 24.7% PF00096 3.4e-05 27.9% 1fgjA(61-409) 3e-23 6.18% g.37.1 1.6e-13 45.5% g.37.1 3.6e-12 45.2% g.37.1 7e-12 44.2% g.37.1 0.00051 16.3% g.37.1 1.5e-12 46.6% g.37.1 8.6e-05 18.3%

Sequence

MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEEEEEPAVEIEPEPEPQPQPQPQPQPQPVAPAPPPAKK
RRGRPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQAAPAD
APNGDLTPEMILSMMDR

Region:1-737
Length:737aa
Label:Full sequence
Reset:click