Input sequence

Protein name Cadherin-1
Organism Rattus norvegicus Length 886
Disorder content 16.6% ProS content 12.5%
IDEAL NA UniProt Q9R0T4

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 886 1-27 28-122 123-151 152-710 711-712 713-735 736-803 804-842 843-859 860-882 883-886 28-122 152-710 713-735 804-842 860-882 1-27 123-151 711-712 736-803 843-859 883-886 1-27 142-147 711-712 736-799 843-854 159-694 786-883 32-158 159-694 786-883 737-881 32-120 274-369 163-257 271-370 384-482 495-590 602-690 736-883 209-636 593-692 32-158 24-191 157-258 254-412 372-484 479-628 593-700 11-15 125-133 476-484 713-733 757-770 841-865 713-735 3q2vA(1-532) 0.0 91.6% 3ifqC(1-90) 3e-33 79.59% 1op4A(9-136) 3e-05 29.85% 3q2vA(1-532) 2e-173 91.6% 3ifqC(1-90) 5e-16 79.59% PF01049(1-139) 5e-17 56.46% PF08758(2-90) 1e-16 50.0% PF00028(4-91) 4e-05 40.62% PF00028 4.1e-17 67.4% PF00028 3.5e-30 110.9% PF00028 4.9e-22 83.8% PF00028 5.2e-15 60.5% PF00028 5.6e-13 53.7% PF01049 2.9e-97 333.7% 1dnvA(6-400) 6e-41 7.44% 1l3wA5(1-99) 1e-07 44.0% 1op4A(9-136) 6e-15 28.36% b.1.6 1.8e-20 70.9% b.1.6 7.1e-17 58.2% b.1.6 5.6e-35 120.7% b.1.6 8.8e-25 91.6% b.1.6 2.6e-28 97.8% b.1.6 1.2e-27 88.5%

Sequence

MGARCRSFSALLLLLQVSSWLCQQPESESDSCRPGFSSEVYTFLVPERHLERGHILGRVK
FEGCTGRPRTAFFSEDSRFKVSTDGVITVKRHLKLHKLETSFLVHAWDSSYRKLSTKVTL
KSLGHHHHRHHHRDPVSESNPELLTFPSFHQGLRRQKRDWVIPPINCPENQKGEFPQRLV
QIKSNRDKETTVFYSITGPGADKPPVGVFIIERETGWLKVTQPLDREAIDKYLLYSHAVS
SNGEAVEDPMEIVVTVTDQNDNRPEFIQEVFEGSVAEGALPGTSVMQVSATDADDDINTY
NAAIAYTILSQDPELPHKNMFTVNRDTGVISVVTSGLDRESYPTYTLVVQAADLQGEGLS
TTAKAVITVKDINDNAPIFNPSTYQGQVLENEVGARIATLKVTDDDAPNTPAWNAVYTVV
NDPDHQFTVITDPKTNEGILKTAKGLDFEAKQQYILHVTVENEEPFEGSLVPSTATVTVD
VVDVNEAPIFVPAEKRVEVPEDFGVGLEIASYTAREPDTFMEQKITYRIWRDTANWLEIN
PETGVISTRAEMDREDSEHVKNSTYTALIIATDDGSPIATGTGTLLLVLSDVNDNAPIPE
PRNMQFCQRNPKPHVITILDPDLPPNTSPFTAELTHGASVNWTIEYNDAEQESLILQPRK
DLEIGEYKINLKLSDNQNKDQVTTLEVHVCDCEGTVNNCMKAISLEAGLQVPAILGILGG
ILALLILILLLLLFLRRRTVVKEPLLPPDDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGL
DARPEVIRNDVAPTLMSMPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYE
GSGSEAASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEED

Region:1-886
Length:886aa
Label:Full sequence
Reset:click