Input sequence

Protein name Sodium channel protein type 11 subunit alpha
Organism Mus musculus Length 1765
Disorder content 18.0% ProS content 12.9%
IDEAL NA UniProt Q9R053

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1765 1-27 28-60 61-432 433-525 526-805 806-813 814-845 846-991 992-1685 1686-1693 1694-1736 1737-1765 1-27 61-432 526-805 814-845 992-1685 1694-1736 28-60 433-525 806-813 846-991 1686-1693 1737-1765 28-41 48-60 433-477 485-499 505-525 846-849 862-917 923-933 969-980 1686-1693 1737-1765 1588-1728 1302-1322 1588-1730 1302-1322 1073-1288 162-397 1381-1583 613-786 962-1045 160-397 609-798 812-1045 1071-1288 1381-1583 571-677 1342-1465 1031-1116 174-276 113-406 575-807 975-1297 1300-1611 27-43 374-381 475-487 788-803 900-911 1126-1137 1416-1428 1542-1558 1683-1694 1733-1744 401-432 127-149 162-184 194-211 224-246 256-278 335-354 369-391 575-594 609-628 695-717 776-798 1035-1054 1074-1093 1100-1122 1157-1179 1224-1246 1266-1288 1344-1366 1381-1401 1408-1430 1476-1498 1561-1583 4dckA(1-141) 9e-48 70.21% 1byyA(1-21) 0.0002 95.24% 4dckA(1-143) 1e-38 69.23% 1byyA(1-21) 1e-05 95.24% PF00520(3-198) 7e-30 38.57% PF00520(3-198) 3e-26 34.58% PF00520(1-198) 1e-24 38.32% PF00520(5-186) 2e-21 36.22% PF06512(135-219) 2e-09 36.78% PF00520 1.3e-65 228.6% PF00520 3.6e-59 207.2% PF06512 1.4e-131 447.8% PF00520 2.3e-67 234.4% PF00520 8e-64 222.6% 1orsC(2-108) 8e-12 12.04% 1orsC(1-119) 2e-11 18.4% 1orsC(2-85) 5e-09 17.44% 2e9xC1(1-103) 7e-10 11.5% f.14.1 6.5e-30 103.9% f.14.1 1.6e-27 95.5% f.14.1 9.4e-38 131.2% f.14.1 6.9e-35 121.2%

Sequence

MEERYYPVIFPDERNFRPFTFDSLAAIEKRITIQKEKKKSKDKAATEPQPRPQLDLKASR
KLPKLYGDVPPDLIAKPLEDLDPFYKDHKTFMVLNKKRTIYRFSAKRALFILGPFNPIRS
FMIRISVHSVFSMFIICTVIINCMFMANNSSVDSRPSSNIPEYVFIGIYVLEAVIKILAR
GFIVDEFSYLRDPWNWLDFIVIGTAIAPCFLGNKVNNLSTLRTFRVLRALKAISVISGLK
VIVGALLRSVKKLVDVMVLTLFCLSIFALVGQQLFMGILSQKCIKDDCGPNAFSNKDCFV
KENDSEDFIMCGNWLGRRSCPDGSTCNKTTFNPDYNYTNFDSFGWSFLAMFRVMTQDSWE
KLYRQILRTSGIYFVFFFVVVIFLGSFYLLNLTLAVVTMAYEEQNRNVAAETEAKEKMFQ
EAQQLLREEKEALVAMGIDRTSLNSLQASSFSPKKRKFFGSKTRKSFFMRGSKTARASAS
DSEDDASKNPQLLEQTKRLSQNLPVELFDEHVDPLHRQRALSAVSILTITMQEQEKSQEP
CFPCGKNLASKYLVWECSPPWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMD
NSLKDILKIGNWVFTGIFIAEMCLKIIALDPYHYFRHGWNIFDSIVALVSLADVLFHKLS
KNLSFLASLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMRLF
GAKFNKTCSTSPESLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEMEGSPLCVIVFV
LIMVVGKLVVLNLFIALLLNSFSNEEKDGNPEGETRKTKVQLALDRFSRAFYFMARALQN
FCCKRCRRQNSPKPNEATESFAGESRDTATLDTRSWKEYDSEMTLYTGQAGAPLAPLAKE
EDDMECCGECDASPTSQPSEEAQACDLPLKTKRLPSPDDHGVEMEVFSEEDPNLTIQSAR
KKSDAASMLSECSTIDLNDIFRNLQKTVSPQKQPDRCFPKGLSCIFLCCKTIKKKSPWVL
WWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIF
LLEMILKWVAFGFRKYFTSAWCWLDFLIVVVSGLSLTNLPNLKSFRNLRALRPLRALSQF
EGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINGTDINKYFNASN
VPNQSQCLVSNYTWKVPNVNFDNVGNAYLALLQVATYKGWLDIMNAAVDSRGKDEQPAFE
ANLYAYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDIFMTEEQKKYYNAMKKL
GTKKPQKPIPRPLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFD
ILNIVFVVIFTVECLIKVFALRQHYFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTL
FRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNWFSK
VKRGSGIDDIFNFDTFSGSMLCLFQITTSAGWDALLNPMLESKASCNSSSQESCQQPQIA
IVYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEIWEKFDPEATQF
IQYSSLSDFADALPEPLRVAKPNRFQFLMMDLPMVMGDRLHCMDVLFAFTTRVLGNSSGL
DTMKAMMEEKFMEANPFKKLYEPIVTTTKRKEEEECAAVIQRAYRRHMEKMIKLKLKGRS
SSSLQVFCNGDLSSLDVPKIKVHCD

Region:1-1765
Length:1765aa
Label:Full sequence
Reset:click