Input sequence

Protein name Short transient receptor potential channel 1
Organism Rattus norvegicus Length 759
Disorder content 11.5% ProS content 9.4%
IDEAL NA UniProt Q9QX01

Prediction

Order Disorder ProS RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 759 1-41 42-260 261-267 268-662 663-693 694-751 752-759 42-260 268-662 694-751 1-41 261-267 663-693 752-759 1-8 25-41 261-267 663-693 752-759 50-147 159-220 159-221 423-611 186-284 53-146 15-149 15-28 364-375 587-609 713-740 317-338 353-375 474-496 506-525 550-572 587-609 1s70B(43-128) 2e-08 24.49% PF08344(1-62) 4e-15 58.06% PF08344 9.3e-36 129.4% PF00520 3.1e-15 61.2% 2ccqA1(2-99) 7e-13 16.83% 1n11A(303-384) 1e-07 19.15% d.211.1 2.3e-13 41.8%

Sequence

MMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDY
YMVKKILEENSSGDLNINCVDVLGRNAVTITIENESLDILQLLLDYGCQKLMERIQNPEY
STTMDVAPVILAAHRNNYEILTMLLKQDVALPKPHAVGCECTLCSAKNKKDSLRHSRFRL
DIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFWNDYEELARQCKMFAKDLLA
QARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTV
WFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASY
FTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEES
RNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLF
FMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGI
FCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVV
IVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYM
ISSLSKWVCSHTSKGKVRRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTD
QATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPKN

Region:1-759
Length:759aa
Label:Full sequence
Reset:click