Input sequence

Protein name Collagen alpha-1(XX) chain
Organism Homo sapiens Length 1284
Disorder content 26.2% ProS content 20.6%
IDEAL NA UniProt Q9P218

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 1284 1-27 28-64 65-68 69-102 103-107 108-162 163-362 363-371 372-378 379-387 388-389 390-633 634-639 640-647 648-725 726-729 730-1047 1048-1284 28-64 69-102 163-362 372-378 390-633 648-725 730-1047 1-27 108-162 379-387 640-647 1048-1284 4-20 108-117 125-141 158-162 379-387 640-647 1064-1067 1075-1216 1233-1284 557-651 741-833 634-746 481-559 179-357 834-1049 177-356 836-1049 553-652 738-833 650-735 481-559 393-450 1086-1160 179-327 179-351 377-460 467-545 557-639 647-727 740-820 1070-1128 1129-1188 175-355 842-1046 742-829 663-746 393-449 571-764 1089-1162 32-102 173-362 378-466 466-554 557-644 648-735 741-833 893-1027 368-392 451-480 507-521 1071-1084 1108-1126 1165-1191 1248-1264 2ee3A(8-102) 3e-49 98.95% 2ekjA(8-100) 1e-47 98.92% 2ekjA(1-104) 3e-05 36.52% 2dkmA(23-101) 1e-28 97.47% 4igiA(3-181) 4e-20 36.26% 2uurA(2-210) 8e-17 27.78% 1lfaA(2-180) 5e-47 22.65% 2uurA(4-210) 1e-36 25.7% 2ee3A(4-103) 3e-30 94.0% 2ekjA(5-100) 6e-24 95.83% 3rzwA(4-88) 5e-09 28.74% 2dkmA(23-101) 3e-15 97.47% 2h41A(22-80) 0.0002 20.34% 2pneA(11-80) 4e-06 37.33% PF00092(1-148) 5e-16 38.56% PF00092 1.7e-66 231.5% PF00041 5e-13 53.9% PF00041 6.7e-17 66.7% PF00041 6.1e-08 37.0% PF00041 1.1e-11 49.4% PF00041 3e-15 61.3% PF01391 2e-10 45.3% PF01391 9.7e-13 52.9% 1ao3A(2-183) 1e-32 29.67% 1z78A1(3-205) 2e-20 14.69% 1fnfA3(2-89) 2e-13 23.86% 1q38A(1-81) 3e-06 23.53% 1q38A(1-58) 7e-05 27.59% 1cfmA1(3-186) 9e-07 11.62% 1af0A1(145-218) 0.0007 10.81% b.1.2 1.8e-07 24.0% c.62.1 2.6e-59 193.8% b.1.2 2.2e-18 59.5% b.1.2 1.2e-15 54.1% b.1.2 5e-14 48.5% b.1.2 8.6e-12 38.4% b.1.2 4.2e-21 72.7% b.29.1 5.2e-07 20.8%

Sequence

MSSGDPAHLGLCLWLWLGATLGREQVQASGLLRLAVLPEDRLQMKWRESEGSGLGYLVQV
KPMAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRFLLARREFVIEDLKSSS
LDRSSQRPLGSGAPEPTPSHTGSPDPEQASEPQVAFTPSQDPRTPAGPQFRCLPPVPADM
VFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGDAQTEWDLNSLSTKE
QVLAAVRRLRYKGGNTFTGLALTHVLGQNLQPAAGLRPEAAKVVILVTDGKSQDDVHTAA
RVLKDLGVNVFAVGVKNADEAELRLLASPPRDITVHSVLDFLQLGALAGLLSRLICQRLQ
GGSPRQGPAAAPALDTLPAPTSLVLSQVTSSSIRLSWTPAPRHPLKYLIVWRASRGGTPR
EVVVEGPAASTELHNLASRTEYLVSVFPIYEGGVGEGLRGLVTTAPLPPPRALTLAAVTP
RTVHLTWQPSAGATHYLVRCSPASPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSLR
GPEGSEARGIRARTPTLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSG
QTEAPGNATSATLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPSPSQLSMTELPG
DAVQLAWVAAAPSGVLVYQITWTPLGEGKAHEISVPGNLGTAVLPGLGRHTEYDVTILAY
YRDGARSDPVSLRYTPSTVSRSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASG
LGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSATGQTACPALRPDGSL
PGFDLMVAFSLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQLTRRVSDVYPAPLPPEHT
IVFLVRLLPETPREAFALWQMTAEDFQPLLGVLLDAGKKSLTYFHRDPRAALQEATFDPQ
EVRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEMGSPPAAGFVTLGRLAKARGPR
SSSAAFQLQMLQIVCSDTWADEDRCCELPASRDGETCPAFVSACSCSSETPGPPGPQGPP
GLPGRNGTPGEQGFPGPRGPPGVKGEKGDHGLPGLQGHPGHQGIPGRVGLQGPKGMRGLE
GTAGLPGPPGPRGFQGMAGARGTSGERGPPGTVGPTGLPGPKGERGEKGEPQSLATLYQL
VSQASHVSKFDSFHENTRPPMPILEQKLEPGTEPLGSPGTRSKALVPGEWGRGGRHLEGR
GEPGAVGQMGSPGQQGASTQGLWE

Region:1-1284
Length:1284aa
Label:Full sequence
Reset:click