Input sequence

Protein name Probable cleavage and polyadenylation specificity factor subunit 1
Organism Caenorhabditis elegans Length 1454
Disorder content 14.0% ProS content 6.7%
IDEAL NA UniProt Q9N4C2

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam SEG:LCR 0 1454 1-52 53-59 60-388 389-433 434-465 466-470 471-648 649-652 653-682 683-770 771-814 815-818 819-846 847-887 888-893 894-896 897-928 929-1325 1326-1331 1332-1336 1337-1341 1342-1454 1-52 60-388 434-465 471-648 653-682 771-814 847-887 894-896 929-1325 1342-1454 389-433 466-470 683-770 819-846 897-928 1332-1336 397-404 416-421 466-470 690-723 738-756 841-846 897-916 145-583 1125-1447 2-797 925-1450 1098-1420 1076-1387 423-436 537-552 677-684 815-832 2b5lA(125-480) 5e-21 25.62% 2b5lA(821-1124) 0.0004 21.02% 2b5lA(3-678) 2e-41 18.96% 2b5lA(628-1131) 9e-35 16.79% PF03178(18-305) 2e-32 30.56% PF03178 3.9e-57 200.4%

Sequence

MYGYLRETDDSTAINFSAYGKFLPGENTGFQLLTIGAKFIRIFRVNPYVLKEPGEDNEEW
QQKTKLECMFSCRLLNKCHSIAVARVPQLPDQDSILMTFDDAKLSIVSINEKERNMQTIS
LHAFENEYLRDGFINHFQPPLVRSDPSNRCAACLVYGKHIAILPFHENSKRIHSYVIPLK
QIDPRLDNIADMVFLDGYYEPTILFLYEPIQTTPGRACVRYDTMCIMGVSVNIVDRQFAV
VWQTANLPMDCSQLLPIPKPLGGALVFGSNTVVYLNQAVPPCGLVLNSCYDGFTKFPLKD
LKHLKMTLDCSTSVYMEDGRIAVGSRDGDLFLLRLMTSSGGGTVKSLEFSKVYETSIAYS
LTVCAPGHLFVGSRLGDSQLLEYTLLKTTRDCAVKRLKIDNKDPAAAEIELDEDDMELYG
GAIEEQQNDDDEQIDESLQFRELDRLRNVGPVKSMCVGRPNYMSNDLVDAKRRDPVFDLV
TASGHGKNGALCVHQRSLRPEIITSSLLEGAEQLWAVGRKENESHKYLIVSRVRSTLILE
LGEELVELEEQLFVTGEPTVAAGELSQGALAVQVTSTCIALVTDGQQMQEVHIDSNFPVI
QASIVDPYVALLTQNGRLLLYELVMEPYVQLREVDISATSFATWHATAQNLTQLTSISIY
ADASEIMKFAAAEKSMGGGGGGDGEVSTAENAMMKKEQHEEAILLHGEDDDFLYGDEDET
IMEQNFPVENGEATIKQSNTRKRKRLGHDAIQSSRGGEQSDAIDPTRTFSSISHWLIVSH
ENGRLSIHSLPEMEVVYQIGRFSNVPELLVDLTVEEEEKERKAKAQQAAKEASVPTDEAE
QLNTEMKQLCERVLEAQIVGMGINQAHPILMAIVDEQVVLYEMFSSSNPIPGHLGISFRK
LPHFICLRTSSHLNSDGKRAPFEMKINNGKRFSLIHPFERVSSVNNGVMIVGAVPTLLVY
GAWGGMQTHQMTVDGPIKAFTPFNNENVLHGIVYMTQHKSELRIARMHPDFDYEMPYPVK
KIEVGRTIHHVRYLMNSDVYAVVSSIPKPSNKIWVVMNDDKQEEIHEKDENFVLPAPPKY
TLNLFSSQDWAAVPNTEISFEDMEAVTACEDVALKSESTISGLETLLAMGTVNNYGEEVL
VRGRIILCEVIEVVPEPDQPTSNRKIKVLFDKEQKGPVTGLCAINGLLLCGMGQKVFIWQ
FKDNDLMGISFLDMHYYVYQLHSLRTIAIACDARESMSLIRFQEDNKAMSIASRDDRKCA
QPPMASQLVVDGAHVGFLLSDETGNITMFNYAPEAPESNGGERLTVRAAINIGTNINAFV
RLRGHTSLLQLNNEDEKEAIEQRMTTVFASLDGSFGFVRPLTEKSYRRLHFLQTFIGSVT
PQIAGLHIKGSRSAKPSQPIVNGRNARNLIDGDVVEQYLHLSLYDKTDLARRLGVGRYHI
IDDLMQLRRMAFYY

Region:1-1454
Length:1454aa
Label:Full sequence
Reset:click