Input sequence

Protein name HERV-H 2q24.1 provirus ancestral Env polyprotein
Organism Homo sapiens Length 555
Disorder content 9.4% ProS content 9.4%
IDEAL NA UniProt Q9N2J8

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam SEG:LCR TMHMM:TMhelix 0 555 1-69 70-74 75-192 193-196 197-209 210-219 220-285 286-299 300-489 490-517 518-555 1-69 75-192 197-209 220-285 300-489 518-555 210-219 286-299 490-517 210-219 286-299 490-517 419-497 432-475 336-513 15-555 17-44 240-256 516-536 20-42 518-540 4jf3A(1-87) 3e-11 42.53% 1y4mA(2-53) 6e-07 48.08% PF00429(161-345) 1e-19 32.8% PF00429 1.1e-10 -61.4%

Sequence

MILAGRAPSNTSTLMKFYSLLLYSLLFSFPFLYHPLPLPSYLHHTINLTHSLPAASNPSL
ANNCWLCISLSSSAYIAVPTLQTDRATSPVSLHLRTSFNSPHLYPPEELIYFLDRSSKTS
PDISHQPAAALLHIYLKNLSPYINSTPPIFGPLTTQTTIPVAAPLCISRQRPTGIPLGNI
SPSRCSFTLHLQSPTTHVTETIGVFQLHIIDKPSINTDKLKNVSSNYCLGRHLPYISLHP
WLPSPCSSDSPPRPSSCLLTPSPQNNSERLLVDTQRFLIHHENRTSSSMQLAHQSPLQPL
TAAALAGSLGVWVQDTPFSTPSHPFSLHLQFCLTQGLFFLCGSSTYMCLPANWTGTCTLV
FLTPKIQFANGTKELPVPLMTLTPQKRVIPLIPLMVGLGLSASTIALSTGIAGISTSVTT
FRSPSNDFSASITDISQTLSVLQAQVDSLAAVVLQNRRGLGLSILLNEECCFYLNQSGLV
YENIKKLKDRAQKLANQASNYAESPWALSNWMSWVLPILSPLIPIFLLLLFGPCIFHLVS
QFIQNRIQAITNHSI

Region:1-555
Length:555aa
Label:Full sequence
Reset:click