Input sequence

Protein name Pentatricopeptide repeat-containing protein At5g02860
Organism Arabidopsis thaliana Length 819
Disorder content 9.3% ProS content 4.5%
IDEAL NA UniProt Q9LYZ9

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 819 1-76 77-819 77-819 1-76 1-13 47-56 63-76 130-801 92-801 209-243 280-314 315-349 350-384 385-419 420-454 455-489 490-524 525-559 595-629 630-664 665-699 700-734 735-769 353-586 176-408 493-739 703-801 40-517 453-801 29-50 66-77 4m57A(31-668) 1e-106 35.66% 4m57A(1-668) 1e-113 30.94% PF01535 8.8e-12 49.8% PF01535 1.2e-06 32.7% PF01535 4.5e-10 44.1% PF01535 3.9e-13 54.3% PF01535 1.9e-12 51.9% PF01535 1.9e-06 32.1% PF01535 1e-08 39.5% PF01535 5.6e-10 43.8% PF01535 5.8e-08 37.1% PF01535 0.00094 23.1% PF01535 6.4e-05 26.9% PF01535 1.3e-05 29.2% PF01535 2.2e-11 48.4% PF01535 1.3e-07 35.9% 2fsqA1(2-231) 1e-33 8.86% 2fsqA1(1-232) 6e-31 5.44% 2fsqA1(2-209) 1e-26 6.85% 1nnvA(2-99) 1e-14 15.0% a.118.8 1.9e-22 71.8% a.118.8 5.9e-21 71.5%

Sequence

MADKLALPLLLPCTPSSKPYSHDQNHHISRTPFLTTSLSSPPPPPVEPLLHDVFLHQNPN
SRQPISSQTSRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVL
SELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIII
SMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCK
PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ
VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA
RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC
TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM
KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW
EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTL
VLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF
TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR
IFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC
KLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIVKKWP

Region:1-819
Length:819aa
Label:Full sequence
Reset:click