Input sequence

Protein name ERAD-associated E3 ubiquitin-protein ligase HRD1A
Organism Arabidopsis thaliana Length 492
Disorder content 26.0% ProS content 4.5%
IDEAL NA UniProt Q9LW77

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 492 1-336 337-444 445-472 473-492 1-336 445-472 337-444 473-492 378-386 397-402 438-444 280-330 280-331 292-329 292-329 265-337 269-333 42-57 351-392 445-472 7-24 44-66 99-121 141-160 173-195 224-246 2lxhC(3-53) 2e-13 60.78% 2lxhC(3-54) 2e-18 59.62% PF00097(1-43) 3e-05 51.16% PF00097 1.6e-10 45.5% 1rmdA2(4-72) 1e-11 22.97% g.44.1 1.6e-17 58.8%

Sequence

MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL
VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA
QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM
ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG
VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT
NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSS
GNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGVPGTEQVS
TEPDQTLPQHNLPVENSHAYANMSETKLEEMRKSLETHLEILRNRLHFLETRKPESAGEP
ENKGKSVADAAE

Region:1-492
Length:492aa
Label:Full sequence
Reset:click