Input sequence

Protein name DNA-directed RNA polymerase D subunit 2b
Organism Arabidopsis thaliana Length 1119
Disorder content 3.1% ProS content 3.1%
IDEAL NA UniProt Q9LV32

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1119 1-16 17-197 198-208 209-770 771-778 779-912 913-918 919-1067 1068-1072 1073-1119 17-197 209-770 779-912 919-1067 1073-1119 1-16 198-208 771-778 1-16 198-208 771-778 31-1111 32-1117 645-1014 1018-1115 520-582 38-404 424-482 38-405 422-487 520-582 596-639 644-1016 1018-1117 31-1117 14-1117 603-614 1i50B(18-1083) 4e-152 33.45% 4qiwB(14-1067) 5e-148 28.1% PF00562(2-384) 3e-42 31.87% PF04560(1-84) 4e-15 42.86% PF04566(1-63) 2e-11 49.21% PF04563(1-363) 5e-10 22.93% PF04565(3-64) 7e-08 40.3% PF04563 5.1e-14 57.2% PF04565 1.5e-10 45.7% PF04566 5.7e-22 83.6% PF04567 6.3e-10 43.6% PF00562 5.5e-91 312.8% PF04560 3.5e-42 150.7% 1i3qB(16-1078) 0.0 31.9% e.29.1 2.2e-303 989.3%

Sequence

MDVDEIESAGQINISELGESFLQTFCKKAATSFFEEFGLISHQLNSYNFFIEHGLQNVFE
SFGDILVEPSFDVIKKKDGDWRYATVFKKIVIKHDKFKTGQDEYVEKEILDVKKQDILIG
SIPVMVKSVLCKTSEKGKENCKKGNCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISNSP
WTVSFRSETKRNRFIVRLSENEKAEDYKIMEKVLTVYFLSTEIPVWLLFFALGVSSDKEA
MDLIAFDGDDASITNSLIASIHEADAVCEAFRCGNNALTYVEHQIKSTKFPPAESVDDCL
RLYLFPCLQGLKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVH
LAHARRKMTRAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFSTGAWSHPFRKMERVSGV
VANLGRANPLQTLIDLRRTRQQVLYTGKVGDARHPHPSHWGRVCFLSTPDGENCGLVKNM
SLLGLVSTQGLESVVEMLFTCGMEELMNDTSTPLCGKHKVLLNGDWVGLCADSESFVGEL
KSRRRQSELPLEMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLHKLKQDKPTQYPFKHLL
DQGILELIGIEEEEDCTTAWGIKQLLKEPKNYTHCELDLSFLLGVSCAIVPFANHDHGKR
VLYQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECLEKEVLFNGQNAIV
AVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDTKDSEKRKKMDELVQFGKTYS
KIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTERGIVQKVVLSSNDEG
KNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVPDIVINPHAFPSR
QTPGQLLEAALSKGIACPIQKKEGSSAAYTKLTRHATPFSTPGVTEITEQLHRAGFSRWG
NERVYNGRSGEMMRSLIFMGPTFYQRLVHMSENKVKFRNTGPVHPLTRQPVADRKRFGGI
RFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYC
RVCASSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC

Region:1-1119
Length:1119aa
Label:Full sequence
Reset:click