Input sequence

Protein name Pre-mRNA-processing protein 40C
Organism Arabidopsis thaliana Length 835
Disorder content 55.7% ProS content 10.3%
IDEAL NA UniProt Q9LT25

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 835 1-268 269-276 277-295 296-302 303-313 314-318 319-450 451-584 585-590 591-645 646-649 650-695 696-697 698-749 750-754 755-817 818-835 269-276 296-302 314-318 451-584 591-645 650-695 698-749 755-817 1-268 277-295 303-313 319-450 585-590 646-649 696-697 750-754 818-835 248-268 277-279 293-295 303-313 319-335 585-590 696-697 750-754 818-835 249-331 460-509 694-806 526-651 694-835 460-508 579-645 527-579 249-331 245-274 297-326 457-506 592-640 462-508 595-645 246-274 294-330 444-510 511-580 582-646 680-751 440-457 510-525 658-693 759-770 650-695 2l5fA(16-87) 1e-10 40.96% 2kisA(11-59) 5e-10 58.0% 4fqgA(8-108) 2e-06 26.55% 4fqgA(9-127) 0.001 26.87% 4fqgA(8-142) 3e-14 23.13% 2doeA(21-69) 2e-11 38.78% 2doeA(12-72) 1e-07 27.94% 2kiqA(6-57) 3e-05 33.33% 2l5fA(16-87) 9e-06 38.55% PF00397 5.1e-07 33.9% PF00397 2.5e-06 31.6% PF01846 6.6e-12 50.1% PF01846 2e-05 28.6% 2cqnA1(8-56) 2e-06 28.57% 2cqnA1(6-59) 0.0003 22.22% b.72.1 1.2e-05 28.1% b.72.1 2.1e-07 30.8% a.159.2 2.4e-15 55.8% a.159.2 1.9e-08 31.1% a.159.2 1.4e-11 42.3% a.159.2 9.3e-06 21.5%

Sequence

MEGENTTDPPYTTAASSGQSIFVRPPPIAPVLATTSNFSQSELKELHSMSIASTGFVSQS
VPYSVTAQWGTNAAASSNVNPIPQASPMLANAPFGRPGTLAPPGLMTSPPAFPGSNPFST
TPRPGMSAGPAQMNPGIHPHMYPPYHSLPGTPQGMWLQPPSMGGIPRAPFLSHPTTFPGS
YPFPVRGISPNLPYSGSHPLGASPMGSVGNVHALPGRQPDISPGRKTEELSGIDDRAGSQ
LVGNRLDAWTAHKSEAGVLYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTD
WALVSTNDGKKYYYNNKTKVSSWQIPAEVKDFGKKLEERAMESVASVPSADLTEKGSDLT
SLSAPAISNGGRDAASLKTTNFGSSALDLVKKKLHDSGMPVSSTITSEANSGKTTEVTPS
GESGNSTGKVKDAPGAGALSDSSSDSEDEDSGPSKEECSKQFKEMLKERGIAPFSKWEKE
LPKIIFDPRFKAIPSHSVRRSLFEQYVKTRAEEERREKRAAHKAAIEGFRQLLDDASTDI
DQHTDYRAFKKKWGNDLRFEAIERKEREGLLNERVLSLKRSAEQKAQEIRAAAASDFKTM
LREREISINSHWSKVKDSLRNEPRYRSVAHEDREVFYYEYIAELKAAQRGDDHEMKARDE
EDKLRERERELRKRKEREVQEVERVRQKIRRKEASSSYQALLVEKIRDPEASWTESKPIL
ERDPQKRASNPDLEPADKEKLFRDHVKSLYERCVHDFKALLAEALSSEAATLQTEDGKTA
LNSWSTAKQVLKPDIRYSKMPRQDREVVWRRYVEDISRKQRHENYQEEKQRDYKT

Region:1-835
Length:835aa
Label:Full sequence
Reset:click