Input sequence

Protein name Pentatricopeptide repeat-containing protein At3g23020
Organism Arabidopsis thaliana Length 842
Disorder content 0.4% ProS content 0.4%
IDEAL NA UniProt Q9LS88

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 842 1-3 4-842 4-842 1-3 1-3 506-793 297-618 186-360 128-790 188-222 223-257 299-333 334-367 368-402 403-437 506-540 576-610 611-645 684-717 753-787 580-793 337-546 191-412 509-617 155-529 543-816 808-820 414-441 4wslA(4-289) 2e-40 33.56% 4wslA(2-291) 7e-40 34.25% 4ozsA(1-169) 4e-21 34.86% 4m57A(39-674) 1e-65 19.4% PF01535 5.8e-06 30.4% PF01535 1.2e-05 29.4% PF01535 8.5e-12 49.8% PF01535 8.7e-05 26.5% PF01535 2.7e-09 41.5% PF01535 0.00036 24.4% PF01535 3.6e-06 31.1% PF01535 1.1e-08 39.5% PF01535 1.2e-05 29.3% PF01535 5.5e-05 27.2% PF01535 1e-08 39.6% 2fsqA1(3-210) 7e-27 5.56% 2fsqA1(2-210) 1e-22 5.16% 2fsqA1(2-214) 2e-21 7.14% 1nnvA(2-105) 3e-14 10.91% a.118.8 3.1e-19 65.4% a.118.8 5.5e-28 96.3%

Sequence

MLLNLRLDGSSLHVLCSTKTLPISSPLDKFPSFKKLKQNYVPGTHESDKGPQRSTRNGDR
GCGTVAHEVVAGKNLLLVNPSNGCVGKSGIIDGFVDKRSKDARFGGNGLVSEVHTKCSTK
RLSYGGCIPAILEALDSIEDVEDALSPWAERLSNKERTIILKEQIHWERAVEIFEWFKSK
GCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVH
ALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYT
YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK
LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE
AEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDA
YGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK
CTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE
MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY
LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTF
AMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS
SGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGDCVD
EL

Region:1-842
Length:842aa
Label:Full sequence
Reset:click