Input sequence

Protein name DNA-directed RNA polymerase IV subunit 1
Organism Arabidopsis thaliana Length 1453
Disorder content 6.0% ProS content 5.0%
IDEAL NA UniProt Q9LQ02

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1453 1-8 9-140 141-163 164-176 177-183 184-294 295-308 309-900 901-905 906-1284 1285-1317 1318-1444 1445-1453 9-140 164-176 184-294 309-900 906-1284 1318-1444 1-8 141-163 295-308 1285-1317 1445-1453 1-8 141-163 302-308 1285-1290 1298-1317 1445-1453 10-867 874-1259 1346-1420 14-877 1116-1265 1346-1420 315-466 1346-1419 17-316 315-473 476-627 661-796 803-1211 9-917 874-1266 3-1271 525-536 3h0gA(10-877) 1e-54 23.95% 2waqC(57-357) 4e-09 20.67% 2k0mA(24-97) 2e-08 37.33% 4qiwA(2-853) 6e-73 20.97% 4c2mA(1370-1514) 4e-22 21.05% 2k0mA(24-97) 2e-13 37.33% PF00623(1-159) 4e-23 35.58% PF11523(1-76) 6e-13 52.63% PF04997(4-319) 6e-07 24.56% PF00623 2.7e-34 124.6% PF04983 1.1e-28 105.9% PF05000 1.6e-07 35.6% PF04998 6.9e-05 -97.9% 1i3qA(7-917) 8e-107 22.59% 1i3qA(1060-1414) 6e-40 16.95% e.29.1 1.7e-171 580.7%

Sequence

MEDDCEELQVPVGTLTSIGFSISNNNDRDKMSVLEVEAPNQVTDSRLGLPNPDSVCRTCG
SKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPGCKYIRKKQFQITEDQPERCRY
CTLNTGYPLMKFRVTTKEVFRRSGIVVEVNEESLMKLKKRGVLTLPPDYWSFLPQDSNID
ESCLKPTRRIITHAQVYALLLGIDQRLIKKDIPMFNSLGLTSFPVTPNGYRVTEIVHQFN
GARLIFDERTRIYKKLVGFEGNTLELSSRVMECMQYSRLFSETVSSSKDSANPYQKKSDT
PKLCGLRFMKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKER
LVTSFVPTLLDNKEMHVRRGDRLVAIQVNDLQTGDKIFRSLMDGDTVLMNRPPSIHQHSL
IAMTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVELDELVALDKQLINR
QNGRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEPQ
WTGMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGNFIERLLKHDKGKV
LDIIYSAQEMLSQWLLMRGLSVSLADLYLSSDLQSRKNLTEEISYGLREAEQVCNKQQLM
VESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDAYRDVQALAYRYGD
QSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCAAWNDPNSPLRGAK
GKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADLPGTLSRRLMFFMR
DIYAAYDGTVRNSFGNQLVQFTYETDGPVEDITGEALGSLSACALSEAAYSALDQPISLL
ETSPLLNLKNVLECGSKKGQREQTMSLYLSEYLSKKKHGFEYGSLEIKNHLEKLSFSEIV
STSMIIFSPSSNTKVPLSPWVCHFHISEKVLKRKQLSAESVVSSLNEQYKSRNRELKLDI
VDLDIQNTNHCSSDDQAMKDDNVCITVTVVEASKHSVLELDAIRLVLIPFLLDSPVKGDQ
GIKKVNILWTDRPKAPKRNGNHLAGELYLKVTMYGDRGKRNCWTALLETCLPIMDMIDWG
RSHPDNIRQCCSVYGIDAGRSIFVANLESAVSDTGKEILREHLLLVADSLSVTGEFVALN
AKGWSKQRQVESTPAPFTQACFSSPSQCFLKAAKEGVRDDLQGSIDALAWGKVPGFGTGD
QFEIIISPKVHGFTTPVDVYDLLSSTKTMRRTNSAPKSDKATVQPFGLLHSAFLKDIKVL
DGKGIPMSLLRTIFTWKNIELLSQSLKRILHSYEINELLNERDEGLVKMVLQLHPNSVEK
IGPGVKGIRVAKSKHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLK
NGTLESGGFSENP

Region:1-1453
Length:1453aa
Label:Full sequence
Reset:click