Input sequence

Protein name Probable cyclic nucleotide-gated ion channel 10
Organism Arabidopsis thaliana Length 711
Disorder content 16.5% ProS content 10.7%
IDEAL NA UniProt Q9LNJ0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 711 1-61 62-227 228-231 232-627 628-628 629-656 657-711 62-227 232-627 629-656 1-61 628-628 657-711 1-15 23-27 32-49 628-628 660-679 695-711 468-591 405-516 271-531 489-609 122-390 491-591 409-602 334-394 70-410 398-604 656-668 629-656 82-103 118-137 169-191 242-264 365-387 1wgpA(8-131) 4e-46 69.35% 4d7sA(8-119) 3e-13 32.14% 16vpA(51-311) 9e-39 5.75% 4chvA(245-343) 1e-18 25.2% PF00520 5.9e-18 70.3% PF00027 5.9e-07 33.7% 1q3eA(12-188) 9e-25 23.2% 1bl8A(32-92) 1e-06 11.48% f.14.1 7.5e-31 107.1% b.82.3 7.7e-36 124.8%

Sequence

MAFSHDNRVRFKDEGKPLSSEYGYGRKARPSLDRVFKNVKWGFKKPLSFPSHKDPDHKET
SSVTRKNIINPQDSFLQNWNKIFLFACVVALAIDPLFFYIPIVDSARHCLTLDSKLEIAA
SLLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSSYFIIDLLSIL
PLPQIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAW
AGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDRNVSNNF
LTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNL
QTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRML
PEDLRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQ
LLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASD
FCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQFRRLHSKQLQHT
FRFYSVQWRTWSVSFIQAAWRRYCRRKLAKSLRDEEDRLREALASQDKEHNAATVSSSLS
LGGALYASRFASNALHNLRHNISNLPPRYTLPLLPQKPTEPDFTANHTTDP

Region:1-711
Length:711aa
Label:Full sequence
Reset:click