Input sequence

Protein name 110 kDa U5 small nuclear ribonucleoprotein component CLO
Organism Arabidopsis thaliana Length 987
Disorder content 6.4% ProS content 1.7%
IDEAL NA UniProt Q9LNC5

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 987 1-63 64-934 935-941 942-987 64-934 942-987 1-63 1-17 131-969 138-933 138-273 840-926 743-838 136-456 506-580 717-838 840-929 124-453 674-841 841-931 596-673 454-594 122-453 454-594 595-673 674-842 843-971 16-34 1n0uA(10-818) 1e-165 37.2% 3j0eH(9-701) 3e-40 17.39% PF00009(2-130) 7e-21 40.44% PF00679(1-86) 1e-10 41.38% PF03764(28-118) 2e-08 36.08% PF00009 1.2e-53 188.8% PF03144 1.1e-07 36.1% PF03764 1.7e-23 88.7% PF00679 1.1e-34 125.8% 1n0uA2(3-323) 2e-81 33.53% 1n0uA3(1-164) 5e-58 39.29% 1darA4(2-90) 3e-23 34.07% 1n0uA4(2-79) 3e-16 46.15% 1n0uA1(1-138) 4e-16 31.21% c.37.1 6.2e-88 282.1% b.43.3 9.1e-36 119.9% d.58.11 3.2e-18 63.9% d.14.1 1.1e-62 202.5% d.58.11 1.2e-29 106.0%

Sequence

MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENGSDGEQGPGGSNGWITTIND
VEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVKDQA
TYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTD
TRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIV
DAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHI
SAASTTAGDLPLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWGD
VYYHSDTRVFKRSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSNS
AYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESMV
ECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKE
VTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTLP
VVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRE
LYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVS
IDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDSI
VQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATPR
LMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIESFGFETD
LRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSED
VSGNKFFDEAMMVELAQQTGDLHLQMI

Region:1-987
Length:987aa
Label:Full sequence
Reset:click