Input sequence

Protein name E3 ubiquitin-protein ligase At1g12760
Organism Arabidopsis thaliana Length 408
Disorder content 44.4% ProS content 15.9%
IDEAL NA UniProt Q9LN71

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 408 1-95 96-158 159-210 211-268 269-269 270-320 321-345 346-400 401-408 96-158 211-268 270-320 346-400 1-95 159-210 269-269 321-345 401-408 26-31 78-95 190-210 269-269 321-325 337-345 404-408 347-398 297-397 353-393 353-393 347-398 346-397 10-30 33-47 80-91 154-183 255-273 99-121 131-153 222-239 249-268 270-292 1iymA(2-54) 4e-11 49.06% 2l0bA(16-87) 4e-18 27.72% PF00097(1-43) 8e-07 53.49% PF00097 4.9e-09 40.6% 1iymA(2-54) 3e-12 49.06% g.44.1 1.9e-15 50.3%

Sequence

MSTETTTGNSSLIPASSSSSSSDAIDPAPLLFNGDDNEGNNGGGGGERRSVRRQGLREAA
RFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILV
MSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSS
SSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQ
ELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASK
EDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAY
EDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNLDREEV

Region:1-408
Length:408aa
Label:Full sequence
Reset:click