Input sequence

Protein name Putative pentatricopeptide repeat-containing protein At1g13800
Organism Arabidopsis thaliana Length 883
Disorder content 1.6% ProS content 1.6%
IDEAL NA UniProt Q9LMH5

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 883 1-14 15-883 15-883 1-14 1-14 360-678 603-865 152-476 259-857 150-355 292-326 327-361 362-396 397-431 432-466 467-501 601-635 636-670 699-733 762-796 797-831 832-866 606-862 330-530 151-380 559-646 324-738 758-861 233-247 4wslA(2-291) 1e-42 31.66% 4wslA(6-282) 5e-38 34.3% 4wslA(9-293) 1e-28 27.38% 4m57A(43-662) 2e-78 18.4% 4ozsA(6-171) 1e-13 21.84% PF01535 0.00047 24.1% PF01535 0.001 23.0% PF01535 5.3e-06 30.5% PF01535 9.8e-11 46.3% PF01535 5.6e-06 30.5% PF01535 2e-06 32.0% PF01535 9.3e-05 26.4% PF01535 1.8e-11 48.7% PF01535 1.5e-09 42.3% PF01535 3.7e-07 34.4% PF01535 2.8e-11 48.1% PF01535 1.6e-11 48.9% 2fsqA1(4-230) 2e-24 5.62% 2fsqA1(2-198) 2e-22 5.39% 2fsqA1(3-225) 2e-11 6.81% 1fshA(1-89) 1e-07 10.75% a.118.8 3.4e-21 67.7% a.118.8 2e-09 28.7%

Sequence

MRVFPIPLLSHVRGLIRQGPSSRFYVVPALARTNLTISHSEQVKEGTFDYKALELNDIGV
LRVLNSMKDDPYLALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRG
DEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAP
DIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLL
SRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRG
LCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRIN
CVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFR
EMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNG
LAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVK
GFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEK
SMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFED
MKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYAL
FKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEA
KRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAG
CCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAKGLR

Region:1-883
Length:883aa
Label:Full sequence
Reset:click