Input sequence

Protein name Pentatricopeptide repeat-containing protein At5g28460
Organism Arabidopsis thaliana Length 766
Disorder content 5.0% ProS content 2.2%
IDEAL NA UniProt Q9LKU8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 766 1-38 39-41 42-766 42-766 1-38 13-29 369-660 134-451 580-746 368-662 266-439 580-746 134-342 408-434 371-405 407-441 442-476 477-511 547-581 582-616 617-650 653-687 374-592 550-745 257-452 404-715 61-82 187-203 4wslA(2-291) 2e-52 40.07% 4wslA(20-293) 3e-32 31.45% 4ozsA(1-166) 1e-24 37.13% 4wslA(1-293) 3e-58 39.66% 4ozsA(9-175) 1e-31 36.21% 4ozsA(1-169) 3e-30 37.06% 4pjrA(4-175) 5e-06 22.97% PF01535(1-27) 0.0004 62.96% PF01535 2.9e-07 34.7% PF01535 2e-13 55.2% PF01535 0.00087 23.2% PF01535 1.2e-09 42.6% PF01535 8.9e-06 29.8% PF01535 9e-09 39.7% PF01535 5.2e-06 30.6% PF01535 7.3e-09 40.0% 2fsqA1(2-215) 3e-31 5.86% 2fsqA1(2-195) 3e-24 8.46% 2fsqA1(30-215) 3e-19 6.53% a.118.8 1.3e-23 80.9%

Sequence

MSIMLSISRRQNSYILLNHSRFLRRFSYDVDPRPEIKSESQEFVVVKFVKTLQNTPQHDW
ASSESLSALVVSSSSASPLVFSQITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQ
SVIEFAGSEPDPRDKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDS
NMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTE
EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL
LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT
DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG
KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM
TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG
GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV
ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILIN
AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP
NQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASPFDVFSLG

Region:1-766
Length:766aa
Label:Full sequence
Reset:click