Input sequence

Protein name Putative pentatricopeptide repeat-containing protein At3g18840
Organism Arabidopsis thaliana Length 678
Disorder content 0.0% ProS content 0.0%
IDEAL NA UniProt Q9LHN5

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 678 1-678 1-678 16-256 324-554 224-379 24-578 24-58 226-260 460-494 431-660 27-268 197-379 301-497 22-321 324-631 270-277 580-591 4wslA(31-279) 6e-18 28.46% 4wslA(1-237) 5e-15 25.1% 4ozsA(1-164) 3e-05 22.89% 4m57A(70-651) 9e-40 15.12% PF01535 0.00049 24.0% PF01535 3.2e-08 37.9% PF01535 2.6e-08 38.2% 2fsqA1(1-231) 9e-33 8.05% 2fsqA1(2-212) 3e-16 9.2% 2fsqA1(2-191) 2e-12 5.24% 2fsqA1(4-207) 8e-10 6.34% a.118.8 3.4e-12 37.9% a.118.8 1.8e-23 75.2%

Sequence

MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV
IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD
IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC
NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY
EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG
IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW
TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL
RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ
HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY
GKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRY
IQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIY
AMLHFVTKDLSEIDEIMI

Region:1-678
Length:678aa
Label:Full sequence
Reset:click