Input sequence

Protein name Squamosa promoter-binding-like protein 1
Organism Oryza sativa subsp.japonica Length 862
Disorder content 33.2% ProS content 15.2%
IDEAL NA UniProt Q9LGU7

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 862 1-103 104-166 167-320 321-660 661-667 668-762 763-766 767-795 796-862 104-166 321-660 668-762 796-862 1-103 167-320 767-795 8-28 50-64 167-178 202-214 219-250 273-277 295-320 782-788 107-180 105-180 684-743 107-182 106-184 105-184 684-740 104-189 675-744 190-215 754-765 820-839 1ul4A(4-77) 2e-23 63.51% 1ul4A(2-77) 4e-20 61.84% 1blxB(104-155) 0.0002 28.33% PF03110(2-77) 3e-28 69.74% PF03110 2.9e-41 147.7% 1ul4A(2-81) 4e-19 58.75% 1wdyA(184-237) 0.0002 22.81% g.72.1 1.9e-36 120.0% d.211.1 1.9e-05 15.8%

Sequence

MSSGLKKKGLEWDLNDWRWDSNLFLATPSNASPSKCSRRELGRAEGEIDFGVVDKRRRVS
PEDDDGEECINAATTNGDDGQISGQRGRSSEDEMPRQGTCSSSGPCCQVDGCTVNLSSAR
DYNKRHKVCEVHTKSGVVRIKNVEHRFCQQCSRFHFLQEFDEGKKSCRSRLAQHNRRRRK
VQVQAGVDVNSLHENHSLSNTLLLLLKQLSGLDSSGPSEQINGPNYLTNLVKNLAALAGT
QRNQDMLKNANSAAIASHTGNYVAKGNSLHDSRPHIPVGTESTAEEPTVERRVQNFDLND
AYVEGDENRTDKIVFKLFGKEPNDFPSDLRAQILSWLSNCPSDIESYIRPGCIILTIYMR
LPNWMWDKLAADPAHWIQKLISLSTDTLWRTGWMYARVQDYLTLSCNGNLMLASPWQPAI
GNKHQILFITPIAVACSSTANFSVKGLNIAQPTTKLLCIFGGKYLIQEATEKLLDDTKMQ
RGPQCLTFSCSFPSTSGRGFIEVEDLDQSSLSFPFVVAEEDVCSEIRTLEHLLNLVSFDD
TLVEKNDLLASRDRALNFLHEFGWFLQRSHIRATSETPKDCTEGFPAARFRWLLSFAVDR
EFCAVIKKLLDTLFQGGVDLDVQSTVEFVLKQDLVFVAVNKRSKPLIDFLLTYTTSSAPM
DGTESAAPAQFLFTPDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDA
TGLTPEDYARKRGHESYIEMVQNKIDSRLPKAHVSVTISSTTSTTDFTEKHASQSKTTDQ
TAFDVEKGQQISTKPPLSCRQCLPELAYRHHLNRFLSTRPAVLSLVAIAAVCVCVGLIMQ
GPPHIGGMRGPFRWNSLRSGPK

Region:1-862
Length:862aa
Label:Full sequence
Reset:click