Input sequence

Protein name Pentatricopeptide repeat-containing protein At5g01110
Organism Arabidopsis thaliana Length 729
Disorder content 6.6% ProS content 2.5%
IDEAL NA UniProt Q9LFC5

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 729 1-48 49-729 49-729 1-48 1-10 16-23 271-560 446-725 180-347 116-727 236-270 271-305 306-340 341-375 376-410 411-445 446-480 481-515 516-550 551-585 586-620 621-655 658-692 693-727 309-536 485-702 117-355 111-401 408-720 27-52 4wslA(4-293) 5e-61 42.07% 4wslA(4-281) 2e-52 38.21% 4pjrA(2-169) 3e-30 39.88% 4m57A(39-671) 4e-81 18.82% PF01535 1.5e-06 32.3% PF01535 1.1e-11 49.5% PF01535 4.8e-14 57.3% PF01535 9.6e-06 29.7% PF01535 1.6e-07 35.6% PF01535 9.2e-10 43.0% PF01535 5.5e-10 43.8% PF01535 1e-10 46.2% PF01535 1.1e-08 39.4% PF01535 5.1e-10 43.9% PF01535 8.8e-10 43.1% PF01535 0.00023 25.1% PF01535 1.9e-11 48.6% PF01535 4.8e-10 44.0% 2fsqA1(2-227) 7e-34 6.44% 2fsqA1(3-214) 4e-32 6.33% 2fsqA1(2-221) 9e-18 7.35% a.118.8 1.3e-17 59.7% a.118.8 8.8e-25 85.0%

Sequence

MIVHRIIPSRVKDPLTRFKPLKNLTTSSSPVFEPSSSSSSSSSSASFSVSDSFLVEKICF
SLKQGNNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMI
HILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARK
LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI
MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG
FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE
KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY
CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS
YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD
MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN
ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY
NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ
RGFSPDDKF

Region:1-729
Length:729aa
Label:Full sequence
Reset:click