Input sequence

Protein name Cyclic nucleotide-gated ion channel 18
Organism Arabidopsis thaliana Length 706
Disorder content 18.8% ProS content 9.3%
IDEAL NA UniProt Q9LEQ3

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 706 1-31 32-604 605-706 32-604 1-31 605-706 1-11 605-622 648-669 692-706 444-567 389-495 438-567 379-454 93-366 467-567 379-578 42-386 374-582 346-364 672-685 48-70 85-107 143-165 175-192 213-235 304-326 339-361 1wgpA(8-131) 8e-43 67.74% 4l11A(13-119) 2e-08 28.04% 1wgpA(2-131) 9e-35 65.38% 3ukvD(3-78) 2e-08 19.74% PF00520 9.7e-07 33.0% PF00027 7.4e-08 36.7% 1q3eA(6-188) 7e-28 24.0% f.14.1 1.6e-27 95.5% b.82.3 7e-42 145.8%

Sequence

MNKIRSLRCLLPETITSASTAASNRGSDGSQFSVLWRHQILDPDSNIVTYWNHVFLITSI
LALFLDPFYFYVPYVGGPACLSIDISLAATVTFFRTVADIFHLLHIFMKFRTAFVARSSR
VFGRGELVMDSREIAMRYLKTDFLIDVAAMLPLPQLVIWLVIPAATNGTANHANSTLALI
VLVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYILASHVLGAMWYLSSIGRQ
FSCWSNVCKKDNALRVLDCLPSFLDCKSLEQPERQYWQNVTQVLSHCDATSSTTNFKFGM
FAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYLGETLFCITICIFGLILFT
LLIGNMQSSLQSMSVRVEEWRVKRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDE
ESILHSLPTDLRREIQRHLCLSLVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREG
DPVNEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNLPSSTR
SVRALSEVEAFALSAEDLKFVAHQFKRLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYK
RRKLAKELSLHESSGYYYPDETGYNEEDEETREYYYGSDEEGGSMDNTNLGATILASKFA
ANTRRGTNQKASSSSTGKKDGSSTSLKMPQLFKPDEPDFSIDKEDV

Region:1-706
Length:706aa
Label:Full sequence
Reset:click